Literature DB >> 16843653

The architectonics of programmable RNA and DNA nanostructures.

Luc Jaeger1, Arkadiusz Chworos.   

Abstract

The past several years have witnessed the emergence of a new world of nucleic-acid-based architectures with highly predictable and programmable self-assembly properties. For almost two decades, DNA has been the primary material for nucleic acid nanoconstruction. More recently, the dramatic increase in RNA structural information led to the development of RNA architectonics, the scientific study of the principles of RNA architecture with the aim of constructing RNA nanostructures of any arbitrary size and shape. The remarkable modularity and the distinct but complementary nature of RNA and DNA nanomaterials are revealed by the various self-assembly strategies that aim to achieve control of the arrangement of matter at a nanoscale level.

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Year:  2006        PMID: 16843653     DOI: 10.1016/j.sbi.2006.07.001

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  86 in total

1.  Toward atomic accuracy in RNA design.

Authors:  Eric Westhof
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

2.  Multistrand RNA secondary structure prediction and nanostructure design including pseudoknots.

Authors:  Eckart Bindewald; Kirill Afonin; Luc Jaeger; Bruce A Shapiro
Journal:  ACS Nano       Date:  2011-11-17       Impact factor: 15.881

3.  Annotation of tertiary interactions in RNA structures reveals variations and correlations.

Authors:  Yurong Xin; Christian Laing; Neocles B Leontis; Tamar Schlick
Journal:  RNA       Date:  2008-10-28       Impact factor: 4.942

4.  Specific RNA self-assembly with minimal paranemic motifs.

Authors:  Kirill A Afonin; Dennis J Cieply; Neocles B Leontis
Journal:  J Am Chem Soc       Date:  2007-12-12       Impact factor: 15.419

5.  Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler.

Authors:  Eckart Bindewald; Calvin Grunewald; Brett Boyle; Mary O'Connor; Bruce A Shapiro
Journal:  J Mol Graph Model       Date:  2008-05-24       Impact factor: 2.518

6.  Interactions of cations with RNA loop-loop complexes.

Authors:  Abhishek Singh; Latsavongsakda Sethaphong; Yaroslava G Yingling
Journal:  Biophys J       Date:  2011-08-03       Impact factor: 4.033

7.  Self-assembling RNA square.

Authors:  Sergey M Dibrov; Jaime McLean; Jerod Parsons; Thomas Hermann
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

8.  Self-assembling RNA nanorings based on RNAI/II inverse kissing complexes.

Authors:  Wade W Grabow; Paul Zakrevsky; Kirill A Afonin; Arkadiusz Chworos; Bruce A Shapiro; Luc Jaeger
Journal:  Nano Lett       Date:  2011-01-13       Impact factor: 11.189

9.  Square-shaped RNA particles from different RNA folds.

Authors:  Isil Severcan; Cody Geary; Erik Verzemnieks; Arkadiusz Chworos; Luc Jaeger
Journal:  Nano Lett       Date:  2009-03       Impact factor: 11.189

10.  Composite RNA aptamers as functional mimics of proteins.

Authors:  Daiying Xu; Hua Shi
Journal:  Nucleic Acids Res       Date:  2009-04-20       Impact factor: 16.971

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