Literature DB >> 20348446

Hypermutation induced by APOBEC-1 overexpression can be eliminated.

Zhigang Chen1, Thomas L Eggerman, Alexander V Bocharov, Irina N Baranova, Tatyana G Vishnyakova, Gyorgy Csako, Amy P Patterson.   

Abstract

APOBEC-1 overexpression in liver has been shown to effectively reduce apoB-100 levels. However, nonspecific hypermutation and liver tumor formation potentially related to hypermutation in transgenic animals compromise its potential use for gene therapy. In studying apoB mRNA editing regulation, we found that the core editing auxiliary factor ACF dose-dependently increases APOBEC-1 nonspecific hypermutation and specific editing with variable site sensitivity. Overexpression of APOBEC-1 together with ACF in human hepatic HepG2 cells hypermutated apoB mRNAs 20%-65% at sites 6639, 6648, 6655, 6762, 6802, and 6845, in addition to the normal 90% editing at 6666. The hypermutation activity of APOBEC-1 was decreased to background levels by a single point APOBEC-1 mutation of P29F or E181Q, while 50% of wild-type control editing at the normal site was retained. The hypermutations on both apoB and novel APOBEC-1 target 1 (NAT1) mRNA were also decreased to background levels with P29F and E181Q mutants in rat liver primary culture cells. The loss of hypermutation with the mutants was associated with significantly decreased APOBEC-1/ACF interaction. These data suggest that nonspecific hypermutation induced by overexpressing APOBEC-1 can be virtually eliminated by site-specific mutation, while maintaining specific editing activity at the normal site, reopening the potential use of APOBEC-1 gene therapy for hyperlipidemia.

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Year:  2010        PMID: 20348446      PMCID: PMC2856876          DOI: 10.1261/rna.1863010

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  33 in total

Review 1.  Molecular regulation, evolutionary, and functional adaptations associated with C to U editing of mammalian apolipoproteinB mRNA.

Authors:  Shrikant Anant; Valerie Blanc; Nicholas O Davidson
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2003

2.  Enhanced binding by cultured human fibroblasts of apo-E-containing lipoproteins as compared with low density lipoproteins.

Authors:  T L Innerarity; R W Mahley
Journal:  Biochemistry       Date:  1978-04-18       Impact factor: 3.162

3.  Functional and morphological characterization of cultures of Kupffer cells and liver endothelial cells prepared by means of density separation in Percoll, and selective substrate adherence.

Authors:  B Smedsrød; H Pertoft; G Eggertsen; C Sundström
Journal:  Cell Tissue Res       Date:  1985       Impact factor: 5.249

4.  Cell surface receptor binding of phospholipid . protein complexes containing different ratios of receptor-active and -inactive E apoprotein.

Authors:  R E Pitas; T L Innerarity; R W Mahley
Journal:  J Biol Chem       Date:  1980-06-10       Impact factor: 5.157

5.  Regulatable liver expression of the rabbit apolipoprotein B mRNA-editing enzyme catalytic polypeptide 1 (APOBEC-1) in mice lacking endogenous APOBEC-1 leads to aberrant hyperediting.

Authors:  Martin Hersberger; Susannah Patarroyo-White; Xiaobing Qian; Kay S Arnold; Lucia Rohrer; Maureen E Balestra; Thomas L Innerarity
Journal:  Biochem J       Date:  2003-01-15       Impact factor: 3.857

6.  ApoB mRNA editing is mediated by a coordinated modulation of multiple apoB mRNA editing enzyme components.

Authors:  Zhigang Chen; Thomas L Eggerman; Amy P Patterson
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2006-08-17       Impact factor: 4.052

7.  A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine.

Authors:  L M Powell; S C Wallis; R J Pease; Y H Edwards; T J Knott; J Scott
Journal:  Cell       Date:  1987-09-11       Impact factor: 41.582

8.  Optimization of apolipoprotein B mRNA editing by APOBEC1 apoenzyme and the role of its auxiliary factor, ACF.

Authors:  Ann Chester; Violetta Weinreb; Charles W Carter; Naveenan Navaratnam
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

9.  The apolipoprotein B mRNA editing complex performs a multifunctional cycle and suppresses nonsense-mediated decay.

Authors:  Ann Chester; Angelika Somasekaram; Maria Tzimina; Adam Jarmuz; Jane Gisbourne; Raymond O'Keefe; James Scott; Naveenan Navaratnam
Journal:  EMBO J       Date:  2003-08-01       Impact factor: 11.598

10.  A novel nuclear localization signal in the auxiliary domain of apobec-1 complementation factor regulates nucleocytoplasmic import and shuttling.

Authors:  Valerie Blanc; Susan Kennedy; Nicholas O Davidson
Journal:  J Biol Chem       Date:  2003-08-01       Impact factor: 5.157

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  6 in total

1.  Heat shock proteins stimulate APOBEC-3-mediated cytidine deamination in the hepatitis B virus.

Authors:  Zhigang Chen; Thomas L Eggerman; Alexander V Bocharov; Irina N Baranova; Tatyana G Vishnyakova; Roger Kurlander; Amy P Patterson
Journal:  J Biol Chem       Date:  2017-06-21       Impact factor: 5.157

2.  Mutator effects and mutation signatures of editing deaminases produced in bacteria and yeast.

Authors:  A G Lada; C Frahm Krick; S G Kozmin; V I Mayorov; T S Karpova; I B Rogozin; Y I Pavlov
Journal:  Biochemistry (Mosc)       Date:  2011-01       Impact factor: 2.487

3.  APOBEC1-mediated editing and attenuation of herpes simplex virus 1 DNA indicate that neurons have an antiviral role during herpes simplex encephalitis.

Authors:  Peter Gee; Yoshinori Ando; Hiroko Kitayama; Seiji P Yamamoto; Yuka Kanemura; Hirotaka Ebina; Yasushi Kawaguchi; Yoshio Koyanagi
Journal:  J Virol       Date:  2011-07-20       Impact factor: 5.103

Review 4.  Off-Target Editing by CRISPR-Guided DNA Base Editors.

Authors:  SeHee Park; Peter A Beal
Journal:  Biochemistry       Date:  2019-08-26       Impact factor: 3.162

5.  Hypermutation of ApoB mRNA by rat APOBEC-1 overexpression mimics APOBEC-3 hypermutation.

Authors:  Zhigang Chen; Thomas L Eggerman; Alexander V Bocharov; Irina N Baranova; Tatyana G Vishnyakova; Roger J Kurlander; Gyorgy Csako; Amy P Patterson
Journal:  J Mol Biol       Date:  2012-02-09       Impact factor: 5.469

6.  A Novel RNA Editing Sensor Tool and a Specific Agonist Determine Neuronal Protein Expression of RNA-Edited Glycine Receptors and Identify a Genomic APOBEC1 Dimorphism as a New Genetic Risk Factor of Epilepsy.

Authors:  Svenja Kankowski; Benjamin Förstera; Aline Winkelmann; Pina Knauff; Erich E Wanker; Xintian A You; Marcus Semtner; Florian Hetsch; Jochen C Meier
Journal:  Front Mol Neurosci       Date:  2018-01-11       Impact factor: 5.639

  6 in total

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