Literature DB >> 20348249

Structure and protein-protein interaction studies on Chlamydia trachomatis protein CT670 (YscO Homolog).

Emily Lorenzini1, Alexander Singer, Bhag Singh, Robert Lam, Tatiana Skarina, Nickolay Y Chirgadze, Alexei Savchenko, Radhey S Gupta.   

Abstract

Comparative genomic studies have identified many proteins that are found only in various Chlamydiae species and exhibit no significant sequence similarity to any protein in organisms that do not belong to this group. The CT670 protein of Chlamydia trachomatis is one of the proteins whose genes are in one of the type III secretion gene clusters but whose cellular functions are not known. CT670 shares several characteristics with the YscO protein of Yersinia pestis, including the neighboring genes, size, charge, and secondary structure, but the structures and/or functions of these proteins remain to be determined. Although a BLAST search with CT670 did not identify YscO as a related protein, our analysis indicated that these two proteins exhibit significant sequence similarity. In this paper, we report that the CT670 crystal, solved at a resolution of 2 A, consists of a single coiled coil containing just two long helices. Gel filtration and analytical ultracentrifugation studies showed that in solution CT670 exists in both monomeric and dimeric forms and that the monomer predominates at lower protein concentrations. We examined the interaction of CT670 with many type III secretion system-related proteins (viz., CT091, CT665, CT666, CT667, CT668, CT669, CT671, CT672, and CT673) by performing bacterial two-hybrid assays. In these experiments, CT670 was found to interact only with the CT671 protein (YscP homolog), whose gene is immediately downstream of ct670. A specific interaction between CT670 and CT671 was also observed when affinity chromatography pull-down experiments were performed. These results suggest that CT670 and CT671 are putative homologs of the YcoO and YscP proteins, respectively, and that they likely form a chaperone-effector pair.

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Year:  2010        PMID: 20348249      PMCID: PMC2876502          DOI: 10.1128/JB.01479-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  56 in total

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Journal:  J Mol Biol       Date:  1999-09-17       Impact factor: 5.469

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3.  Macromolecular TLS refinement in REFMAC at moderate resolutions.

Authors:  Martyn D Winn; Garib N Murshudov; Miroslav Z Papiz
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

4.  Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0.

Authors:  G Bricogne; C Vonrhein; C Flensburg; M Schiltz; W Paciorek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-10-23

5.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
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6.  Interactions of FliJ with the Salmonella type III flagellar export apparatus.

Authors:  Gillian M Fraser; Bertha González-Pedrajo; Jeremy R H Tame; Robert M Macnab
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

7.  YscP of Yersinia pestis is a secreted component of the Yop secretion system.

Authors:  P L Payne; S C Straley
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

8.  Bacterial two-hybrid analysis of interactions between region 4 of the sigma(70) subunit of RNA polymerase and the transcriptional regulators Rsd from Escherichia coli and AlgQ from Pseudomonas aeruginosa.

Authors:  S L Dove; A Hochschild
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

9.  Use of TLS parameters to model anisotropic displacements in macromolecular refinement.

Authors:  M D Winn; M N Isupov; G N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-01

10.  Comparative genomes of Chlamydia pneumoniae and C. trachomatis.

Authors:  S Kalman; W Mitchell; R Marathe; C Lammel; J Fan; R W Hyman; L Olinger; J Grimwood; R W Davis; R S Stephens
Journal:  Nat Genet       Date:  1999-04       Impact factor: 38.330

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  14 in total

1.  Functionally essential interaction between Yersinia YscO and the T3S4 domain of YscP.

Authors:  Romila Mukerjea; Partho Ghosh
Journal:  J Bacteriol       Date:  2013-08-09       Impact factor: 3.490

2.  Common architecture of the flagellar type III protein export apparatus and F- and V-type ATPases.

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Journal:  Nat Struct Mol Biol       Date:  2011-01-30       Impact factor: 15.369

Review 3.  A working model for the type III secretion mechanism in Chlamydia.

Authors:  Joshua C Ferrell; Kenneth A Fields
Journal:  Microbes Infect       Date:  2015-10-26       Impact factor: 2.700

4.  EscO, a functional and structural analog of the flagellar FliJ protein, is a positive regulator of EscN ATPase activity of the enteropathogenic Escherichia coli injectisome.

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Journal:  J Bacteriol       Date:  2014-04-04       Impact factor: 3.490

5.  Ab initio structural modeling of and experimental validation for Chlamydia trachomatis protein CT296 reveal structural similarity to Fe(II) 2-oxoglutarate-dependent enzymes.

Authors:  Kyle E Kemege; John M Hickey; Scott Lovell; Kevin P Battaile; Yang Zhang; P Scott Hefty
Journal:  J Bacteriol       Date:  2011-09-30       Impact factor: 3.490

Review 6.  The Structure and Function of Type III Secretion Systems.

Authors:  Ryan Q Notti; C Erec Stebbins
Journal:  Microbiol Spectr       Date:  2016-02

7.  The Chlamydial Type III Secretion Mechanism: Revealing Cracks in a Tough Nut.

Authors:  Helen Jennifer Betts-Hampikian; Kenneth A Fields
Journal:  Front Microbiol       Date:  2010-10-19       Impact factor: 5.640

8.  Novel Sequence Features of DNA Repair Genes/Proteins from Deinococcus Species Implicated in Protection from Oxidatively Generated Damage.

Authors:  F M Nazmul Hassan; Radhey S Gupta
Journal:  Genes (Basel)       Date:  2018-03-08       Impact factor: 4.096

9.  Common evolutionary origin for the rotor domain of rotary ATPases and flagellar protein export apparatus.

Authors:  Jun-ichi Kishikawa; Tatsuya Ibuki; Shuichi Nakamura; Astuko Nakanishi; Tohru Minamino; Tomoko Miyata; Keiichi Namba; Hiroki Konno; Hiroshi Ueno; Katsumi Imada; Ken Yokoyama
Journal:  PLoS One       Date:  2013-05-28       Impact factor: 3.240

Review 10.  Building a secreting nanomachine: a structural overview of the T3SS.

Authors:  Patrizia Abrusci; Melanie A McDowell; Susan M Lea; Steven Johnson
Journal:  Curr Opin Struct Biol       Date:  2014-04-01       Impact factor: 6.809

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