Literature DB >> 20310066

Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145.

Parthasarathy Sampathkumar1, Sinem A Ozyurt, Johnny Do, Kevin T Bain, Mark Dickey, Logan A Rodgers, Tarun Gheyi, Andrej Sali, Seung Joong Kim, Jeremy Phillips, Ursula Pieper, Javier Fernandez-Martinez, Josef D Franke, Anne Martel, Hiro Tsuruta, Shane Atwell, Devon A Thompson, J Spencer Emtage, Stephen R Wasserman, Michael P Rout, J Michael Sauder, Stephen K Burley.   

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Year:  2010        PMID： 20310066      PMCID： PMC3136511          DOI： 10.1002/prot.22707

Source DB:  PubMed          Journal:  Proteins        ISSN： 0887-3585


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  37 in total

1.  Determination of domain structure of proteins from X-ray solution scattering.

Authors:  D I Svergun; M V Petoukhov; M H Koch
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  Automated protein model building combined with iterative structure refinement.

Authors:  A Perrakis; R Morris; V S Lamzin
Journal:  Nat Struct Biol       Date:  1999-05

3.  Complex formation among the RNA export proteins Nup98, Rae1/Gle2, and TAP.

Authors:  Melanie B Blevins; Ashley M Smith; Erica M Phillips; Maureen A Powers
Journal:  J Biol Chem       Date:  2003-03-13       Impact factor: 5.157

4.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

5.  Self-catalyzed cleavage of the yeast nucleoporin Nup145p precursor.

Authors:  M T Teixeira; E Fabre; B Dujon
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

6.  Autoproteolysis in nucleoporin biogenesis.

Authors:  J S Rosenblum; G Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

7.  Nup98 is a mobile nucleoporin with transcription-dependent dynamics.

Authors:  Eric R Griffis; Nihal Altan; Jennifer Lippincott-Schwartz; Maureen A Powers
Journal:  Mol Biol Cell       Date:  2002-04       Impact factor: 4.138

8.  The three-dimensional structure of the autoproteolytic, nuclear pore-targeting domain of the human nucleoporin Nup98.

Authors:  Alec E Hodel; Mary R Hodel; Eric R Griffis; Krista A Hennig; Gary A Ratner; Songli Xu; Maureen A Powers
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

9.  The yeast nuclear pore complex: composition, architecture, and transport mechanism.

Authors:  M P Rout; J D Aitchison; A Suprapto; K Hjertaas; Y Zhao; B T Chait
Journal:  J Cell Biol       Date:  2000-02-21       Impact factor: 10.539

10.  A conserved biogenesis pathway for nucleoporins: proteolytic processing of a 186-kilodalton precursor generates Nup98 and the novel nucleoporin, Nup96.

Authors:  B M Fontoura; G Blobel; M J Matunis
Journal:  J Cell Biol       Date:  1999-03-22       Impact factor: 10.539
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  9 in total

1.  Structural and functional analysis of an essential nucleoporin heterotrimer on the cytoplasmic face of the nuclear pore complex.

Authors:  Kimihisa Yoshida; Hyuk-Soo Seo; Erik W Debler; Günter Blobel; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

Review 2.  The Structure of the Nuclear Pore Complex (An Update).

Authors:  Daniel H Lin; André Hoelz
Journal:  Annu Rev Biochem       Date:  2019-03-18       Impact factor: 23.643

3.  Integrative structure and functional anatomy of a nuclear pore complex.

Authors:  Seung Joong Kim; Javier Fernandez-Martinez; Ilona Nudelman; Yi Shi; Wenzhu Zhang; Barak Raveh; Thurston Herricks; Brian D Slaughter; Joanna A Hogan; Paula Upla; Ilan E Chemmama; Riccardo Pellarin; Ignacia Echeverria; Manjunatha Shivaraju; Azraa S Chaudhury; Junjie Wang; Rosemary Williams; Jay R Unruh; Charles H Greenberg; Erica Y Jacobs; Zhiheng Yu; M Jason de la Cruz; Roxana Mironska; David L Stokes; John D Aitchison; Martin F Jarrold; Jennifer L Gerton; Steven J Ludtke; Christopher W Akey; Brian T Chait; Andrej Sali; Michael P Rout
Journal:  Nature       Date:  2018-03-14       Impact factor: 49.962

4.  Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata.

Authors:  Parthasarathy Sampathkumar; Seung Joong Kim; Danalyn Manglicmot; Kevin T Bain; Jeremiah Gilmore; Tarun Gheyi; Jeremy Phillips; Ursula Pieper; Javier Fernandez-Martinez; Josef D Franke; Tsutomu Matsui; Hiro Tsuruta; Shane Atwell; Devon A Thompson; J Spencer Emtage; Stephen R Wasserman; Michael P Rout; Andrej Sali; J Michael Sauder; Steven C Almo; Stephen K Burley
Journal:  Proteins       Date:  2012-06-04

5.  An ancient autoproteolytic domain found in GAIN, ZU5 and Nucleoporin98.

Authors:  Yuxing Liao; Jimin Pei; Hua Cheng; Nick V Grishin
Journal:  J Mol Biol       Date:  2014-10-20       Impact factor: 5.469

Review 6.  Integrative structural modeling with small angle X-ray scattering profiles.

Authors:  Dina Schneidman-Duhovny; Seung Joong Kim; Andrej Sali
Journal:  BMC Struct Biol       Date:  2012-07-16

7.  The yeast nuclear pore complex and transport through it.

Authors:  John D Aitchison; Michael P Rout
Journal:  Genetics       Date:  2012-03       Impact factor: 4.562

8.  Interactome Mapping Reveals the Evolutionary History of the Nuclear Pore Complex.

Authors:  Samson O Obado; Marc Brillantes; Kunihiro Uryu; Wenzhu Zhang; Natalia E Ketaren; Brian T Chait; Mark C Field; Michael P Rout
Journal:  PLoS Biol       Date:  2016-02-18       Impact factor: 8.029

9.  Evolutionary divergence of the nuclear pore complex from fungi to metazoans.

Authors:  Kriti Chopra; Shrankhla Bawaria; Radha Chauhan
Journal:  Protein Sci       Date:  2018-12-24       Impact factor: 6.725
  9 in total

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