Literature DB >> 202951

Renaturation of complementary single-stranded DNA circles: complete rewinding facilitated by the DNA untwisting enzyme.

J J Champoux.   

Abstract

Renaturation of two complementary single-stranded circles should be limited by topological constraints against the rewinding of the DNA helix. If a mixture of complementary single-stranded rings is annealed and then treated with the DNA untwisting enzyme, the DNA circles completely renature as judged by (i) the presence of interlocked rings that sediment at 53 S in alkali, (ii) the buoyant density of the renatured DNA in CsCl gradients containing ethidium bromide, and (iii) the resistance of the product to the single-strand-specific S1 nuclease. Therefore, the DNA untwisting enzyme is able to provide a transient single-strand break that is sufficient to allow the two strands to completely rewind. The possibility that the untwisting enzyme might facilitate the initiation of the process of genetic recombination is discussed.

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Year:  1977        PMID: 202951      PMCID: PMC431704          DOI: 10.1073/pnas.74.12.5328

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  EVIDENCE FOR A RING STRUCTURE OF POLYOMA VIRUS DNA.

Authors:  R DULBECCO; M VOGT
Journal:  Proc Natl Acad Sci U S A       Date:  1963-08       Impact factor: 11.205

2.  THE CYCLIC HELIX AND CYCLIC COIL FORMS OF POLYOMA VIRAL DNA.

Authors:  R WEIL; J VINOGRAD
Journal:  Proc Natl Acad Sci U S A       Date:  1963-10       Impact factor: 11.205

3.  Evidence for an intermediate with a single-strand break in the reaction catalyzed by the DNA untwisting enzyme.

Authors:  J J Champoux
Journal:  Proc Natl Acad Sci U S A       Date:  1976-10       Impact factor: 11.205

4.  Purification and characterization of the DNA untwisting enzyme from rat liver.

Authors:  J J Champoux; B L McConaughy
Journal:  Biochemistry       Date:  1976-10-19       Impact factor: 3.162

5.  DNA gyrase: an enzyme that introduces superhelical turns into DNA.

Authors:  M Gellert; K Mizuuchi; M H O'Dea; H A Nash
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

Review 6.  Models of genetic recombination.

Authors:  R D Hotchkiss
Journal:  Annu Rev Microbiol       Date:  1974       Impact factor: 15.500

Review 7.  Symmetry in protein-nucleic acid interaction and its genetic implications.

Authors:  H M Sobell
Journal:  Adv Genet       Date:  1973       Impact factor: 1.944

8.  Knotted single-stranded DNA rings: a novel topological isomer of circular single-stranded DNA formed by treatment with Escherichia coli omega protein.

Authors:  L F Liu; R E Depew; J C Wang
Journal:  J Mol Biol       Date:  1976-09-15       Impact factor: 5.469

9.  Recombination promoted by superhelical DNA and the recA gene of Escherichia coli.

Authors:  W K Holloman; C M Radding
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

10.  A mechanism of duplex DNA replication revealed by enzymatic studies of phage phi X174: catalytic strand separation in advance of replication.

Authors:  J F Scott; S Eisenberg; L L Bertsch; A Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1977-01       Impact factor: 11.205

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  16 in total

1.  Electrophoretic characterization of intracellular forms of bacteriophage phi X174 DNA: identification of novel intermediate of altered superhelix density.

Authors:  P H Johnson; M J Miller; E Wild; S V Kelly; L I Grossman
Journal:  J Virol       Date:  1979-11       Impact factor: 5.103

2.  DNA modifying enzymes of Agrobacterium tumefaciens: effect of DNA topoisomerase, restriction endonuclease, and unique DNA endonuclease on plasmid and plant DNA.

Authors:  J M LeBon; C I Kado; L J Rosenthal; J G Chirikjian
Journal:  Proc Natl Acad Sci U S A       Date:  1978-09       Impact factor: 11.205

3.  Escherichia coli DNA topoisomerase I catalyzed linking of single-stranded rings of complementary base sequences.

Authors:  K Kirkegaard; J C Wang
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

4.  Nick-free formation of reciprocal heteroduplexes: a simple solution to the topological problem.

Authors:  J H Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

5.  In vitro system from Escherichia coli that catalyzes generalized genetic recombination.

Authors:  H Potter; D Dressler
Journal:  Proc Natl Acad Sci U S A       Date:  1978-08       Impact factor: 11.205

6.  Biochemical assay designed to detect formation of recombination intermediates in vitro.

Authors:  H Potter; D Dressler
Journal:  Proc Natl Acad Sci U S A       Date:  1979-03       Impact factor: 11.205

7.  Evidence for inclusion of regions of nonhomology in heteroduplex products of bacteriophage lambda recombination.

Authors:  M Lichten; M S Fox
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

8.  Double Holliday structure: a possible in vivo intermediate form of general recombination in Escherichia coli.

Authors:  I Kobayashi; H Ikeda
Journal:  Mol Gen Genet       Date:  1983

9.  DNA breakage and closure by rat liver type 1 topoisomerase: separation of the half-reactions by using a single-stranded DNA substrate.

Authors:  M D Been; J J Champoux
Journal:  Proc Natl Acad Sci U S A       Date:  1981-05       Impact factor: 11.205

10.  Catenation and knotting of duplex DNA by type 1 topoisomerases: a mechanistic parallel with type 2 topoisomerases.

Authors:  P O Brown; N R Cozzarelli
Journal:  Proc Natl Acad Sci U S A       Date:  1981-02       Impact factor: 11.205

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