Literature DB >> 2027761

Oxalyl-CPG: a labile support for synthesis of sensitive oligonucleotide derivatives.

R H Alul1, C N Singman, G R Zhang, R L Letsinger.   

Abstract

A procedure is described for linking nucleosides covalently to controlled pore glass or cross-linked polystyrene supports by means of an oxalyl anchor. Though stable to triethylamine and diisopropylamine, the nucleoside-oxalyl link can be cleaved within a few minutes at room temperature with ammonium hydroxide in methanol. This new anchor can be used in automated synthesis of conventional oligonucleotides. The primary value, however, is that it enables one to employ solid support methodology to synthesize a variety of base-sensitive oligonucleotide derivatives, as illustrated here by synthesis of oligomers with base protecting groups intact and with methyl phosphotriester groups at the internucleoside links.

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Year:  1991        PMID: 2027761      PMCID: PMC333911          DOI: 10.1093/nar/19.7.1527

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  8 in total

1.  Inhibition of HIV-1 infectivity by phosphate-methylated DNA: retraction.

Authors:  H M Moody; P J Quaedflieg; L H Koole; M H van Genderen; H M Buck; L Smit; S Jurriaans; J L Geelen; J Goudsmit
Journal:  Science       Date:  1990-10-05       Impact factor: 47.728

2.  Synthesis of well-defined phosphate-methylated DNA fragments: the application of potassium carbonate in methanol as deprotecting reagent.

Authors:  W H Kuijpers; J Huskens; L H Koole; C A van Boeckel
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

3.  Chemical synthesis of deoxyoligonucleotides by the phosphoramidite method.

Authors:  M H Caruthers; A D Barone; S L Beaucage; D R Dodds; E F Fisher; L J McBride; M Matteucci; Z Stabinsky; J Y Tang
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

4.  Syntheses and properties of adenine and thymine nucleoside alkyl phosphotriesters, the neutral analogs of dinucleoside monophosphates.

Authors:  P S Miller; K N Fang; N S Kondo; P O Ts'o
Journal:  J Am Chem Soc       Date:  1971-12       Impact factor: 15.419

5.  Methoxyacetyl as a protecting group in ribonucleoside chemistry.

Authors:  C B Reese; J C Stewart
Journal:  Tetrahedron Lett       Date:  1968-08       Impact factor: 2.415

6.  Synthesis of oligodeoxyribonucleotide ethyl phosphotriesters and their specific complex formation with transfer ribonucleic acid.

Authors:  P S Miller; J C Barrett; P O Ts'o
Journal:  Biochemistry       Date:  1974-11-19       Impact factor: 3.162

7.  Oligonucleotide syntheses utilizing beta-benzoylpropionyl, a blocking group with a trigger for selective cleavage.

Authors:  R L Letsinger; M H Caruthers; P S Miller; K K Ogilvie
Journal:  J Am Chem Soc       Date:  1967-12-20       Impact factor: 15.419

8.  Synthesis of DNA via deoxynucleoside H-phosphonate intermediates.

Authors:  B C Froehler; P G Ng; M D Matteucci
Journal:  Nucleic Acids Res       Date:  1986-07-11       Impact factor: 16.971

  8 in total
  17 in total

1.  Hydroquinone-O,O'-diacetic acid ('Q-linker') as a replacement for succinyl and oxalyl linker arms in solid phase oligonucleotide synthesis.

Authors:  R T Pon; S Yu
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

2.  Polyamine-assisted rapid and clean cleavage of oligonucleotides from cis-diol bearing universal support.

Authors:  P Kumar; G Dhawan; R Chandra; K C Gupta
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

3.  One pot general method for the derivatisation of polymer support for oligonucleotide synthesis.

Authors:  P Sharma; A K Sharma; V P Malhotra; K C Gupta
Journal:  Nucleic Acids Res       Date:  1992-08-11       Impact factor: 16.971

4.  Oligodeoxynucleoside phosphoramidates (P-NH2): synthesis and thermal stability of duplexes with DNA and RNA targets.

Authors:  S Peyrottes; J J Vasseur; J L Imbach; B Rayner
Journal:  Nucleic Acids Res       Date:  1996-05-15       Impact factor: 16.971

5.  Selective O-phosphitilation with nucleoside phosphoramidite reagents.

Authors:  S M Gryaznov; R L Letsinger
Journal:  Nucleic Acids Res       Date:  1992-04-25       Impact factor: 16.971

6.  Phosphorus 31 solid state NMR characterization of oligonucleotides covalently bound to a solid support.

Authors:  P M Macdonald; M J Damha; K Ganeshan; R Braich; S V Zabarylo
Journal:  Nucleic Acids Res       Date:  1996-08-01       Impact factor: 16.971

7.  Synthesis and properties of oligonucleotides containing aminodeoxythymidine units.

Authors:  S M Gryaznov; R L Letsinger
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

8.  Vinyldeoxyadenosine in a sarcin-ricin RNA loop and its binding to ricin toxin a-chain.

Authors:  Setu Roday; Suwipa Saen-oon; Vern L Schramm
Journal:  Biochemistry       Date:  2007-05-04       Impact factor: 3.162

9.  Solid phase synthesis of oligodeoxyribonucleoside phosphorodithioates from thiophosphoramidites.

Authors:  K Bjergårde; O Dahl
Journal:  Nucleic Acids Res       Date:  1991-11-11       Impact factor: 16.971

10.  On the rapid deprotection of synthetic oligonucleotides and analogs.

Authors:  N N Polushin; A M Morocho; B C Chen; J S Cohen
Journal:  Nucleic Acids Res       Date:  1994-02-25       Impact factor: 16.971

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