Literature DB >> 20236933

USF and NF-E2 cooperate to regulate the recruitment and activity of RNA polymerase II in the beta-globin gene locus.

Zhuo Zhou1, Xingguo Li, Changwang Deng, Paul A Ney, Suming Huang, Jörg Bungert.   

Abstract

The human beta-globin gene is expressed at high levels in erythroid cells and regulated by proximal and distal cis-acting DNA elements, including promoter, enhancer, and a locus control region (LCR). Transcription complexes are recruited not only to the globin gene promoters but also to the LCR. Previous studies have implicated the ubiquitously expressed transcription factor USF and the tissue-restricted activator NF-E2 in the recruitment of transcription complexes to the beta-globin gene locus. Here we demonstrate that although USF is required for the efficient association of RNA polymerase II (Pol II) with immobilized LCR templates, USF and NF-E2 together regulate the association of Pol II with the adult beta-globin gene promoter. Recruitment of Pol II to the LCR occurs in undifferentiated murine erythroleukemia cells, but phosphorylation of LCR-associated Pol II at serine 5 of the C-terminal domain is mediated by erythroid differentiation and requires the activity of NF-E2. Furthermore, we provide evidence showing that USF interacts with NF-E2 in erythroid cells. The data provide mechanistic insight into how ubiquitous and tissue-restricted transcription factors cooperate to regulate the recruitment and activity of transcription complexes in a tissue-specific chromatin domain.

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Year:  2010        PMID: 20236933      PMCID: PMC2871457          DOI: 10.1074/jbc.M109.098376

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  70 in total

1.  Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics.

Authors:  Marjorie Brand; Jeffrey A Ranish; Nicolas T Kummer; Joan Hamilton; Kazuhiko Igarashi; Claire Francastel; Tian H Chi; Gerald R Crabtree; Ruedi Aebersold; Mark Groudine
Journal:  Nat Struct Mol Biol       Date:  2003-12-29       Impact factor: 15.369

2.  Tandem AP-1-binding sites within the human beta-globin dominant control region function as an inducible enhancer in erythroid cells.

Authors:  P A Ney; B P Sorrentino; K T McDonagh; A W Nienhuis
Journal:  Genes Dev       Date:  1990-06       Impact factor: 11.361

3.  The active spatial organization of the beta-globin locus requires the transcription factor EKLF.

Authors:  Roy Drissen; Robert-Jan Palstra; Nynke Gillemans; Erik Splinter; Frank Grosveld; Sjaak Philipsen; Wouter de Laat
Journal:  Genes Dev       Date:  2004-10-15       Impact factor: 11.361

4.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

5.  Evidence for a locus activation region: the formation of developmentally stable hypersensitive sites in globin-expressing hybrids.

Authors:  W C Forrester; S Takegawa; T Papayannopoulou; G Stamatoyannopoulos; M Groudine
Journal:  Nucleic Acids Res       Date:  1987-12-23       Impact factor: 16.971

6.  The "beta-like-globin" gene domain in human erythroid cells.

Authors:  D Tuan; W Solomon; Q Li; I M London
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

7.  The beta-globin nuclear compartment in development and erythroid differentiation.

Authors:  Robert-Jan Palstra; Bas Tolhuis; Erik Splinter; Rian Nijmeijer; Frank Grosveld; Wouter de Laat
Journal:  Nat Genet       Date:  2003-09-21       Impact factor: 38.330

8.  Developmental stage-specific epigenetic control of human beta-globin gene expression is potentiated in hematopoietic progenitor cells prior to their transcriptional activation.

Authors:  Stefania Bottardi; Angelique Aumont; Frank Grosveld; Eric Milot
Journal:  Blood       Date:  2003-08-14       Impact factor: 22.113

9.  Role of AP1/NFE2 binding sites in endogenous alpha-globin gene transcription.

Authors:  Melanie R Loyd; Yasuhiro Okamoto; Mindy S Randall; Paul A Ney
Journal:  Blood       Date:  2003-08-14       Impact factor: 22.113

10.  Position-independent, high-level expression of the human beta-globin gene in transgenic mice.

Authors:  F Grosveld; G B van Assendelft; D R Greaves; G Kollias
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

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  27 in total

Review 1.  Regulation and function of the NFE2 transcription factor in hematopoietic and non-hematopoietic cells.

Authors:  Jadwiga J Gasiorek; Volker Blank
Journal:  Cell Mol Life Sci       Date:  2015-02-27       Impact factor: 9.261

Review 2.  Phase Separation and Transcription Regulation: Are Super-Enhancers and Locus Control Regions Primary Sites of Transcription Complex Assembly?

Authors:  Aishwarya Gurumurthy; Yong Shen; Eliot M Gunn; Jörg Bungert
Journal:  Bioessays       Date:  2018-11-30       Impact factor: 4.345

Review 3.  Role of helix-loop-helix proteins during differentiation of erythroid cells.

Authors:  Archana Anantharaman; I-Ju Lin; Joeva Barrow; Shermi Y Liang; Jude Masannat; John Strouboulis; Suming Huang; Jörg Bungert
Journal:  Mol Cell Biol       Date:  2011-01-31       Impact factor: 4.272

4.  DNA·RNA triple helix formation can function as a cis-acting regulatory mechanism at the human β-globin locus.

Authors:  Zhuo Zhou; Keith E Giles; Gary Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-13       Impact factor: 11.205

5.  Neutralizing the function of a β-globin-associated cis-regulatory DNA element using an artificial zinc finger DNA-binding domain.

Authors:  Joeva J Barrow; Jude Masannat; Jörg Bungert
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-16       Impact factor: 11.205

6.  Discovery and validation of information theory-based transcription factor and cofactor binding site motifs.

Authors:  Ruipeng Lu; Eliseos J Mucaki; Peter K Rogan
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

7.  Resveratrol ameliorates TNFα-mediated suppression of erythropoiesis in human CD34(+) cells via modulation of NF-κB signalling.

Authors:  Jee-Yeong Jeong; Matthew Silver; Aric Parnes; Sarah Nikiforow; Nancy Berliner; Gary J Vanasse
Journal:  Br J Haematol       Date:  2011-07-18       Impact factor: 6.998

Review 8.  EKLF/KLF1, a tissue-restricted integrator of transcriptional control, chromatin remodeling, and lineage determination.

Authors:  Yvette Y Yien; James J Bieker
Journal:  Mol Cell Biol       Date:  2012-10-22       Impact factor: 4.272

9.  RUNX1 and NF-E2 upregulation is not specific for MPNs, but is seen in polycythemic disorders with augmented HIF signaling.

Authors:  Katarina Kapralova; Lucie Lanikova; Felipe Lorenzo; Jihyun Song; Monika Horvathova; Vladimir Divoky; Josef T Prchal
Journal:  Blood       Date:  2013-12-02       Impact factor: 22.113

10.  A tissue-specific chromatin loop activates the erythroid ankyrin-1 promoter.

Authors:  Ashley O Yocum; Laurie A Steiner; Nancy E Seidel; Amanda P Cline; Emily D Rout; Jolinta Y Lin; Clara Wong; Lisa J Garrett; Patrick G Gallagher; David M Bodine
Journal:  Blood       Date:  2012-09-11       Impact factor: 22.113

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