Literature DB >> 15489291

The active spatial organization of the beta-globin locus requires the transcription factor EKLF.

Roy Drissen1, Robert-Jan Palstra, Nynke Gillemans, Erik Splinter, Frank Grosveld, Sjaak Philipsen, Wouter de Laat.   

Abstract

Three-dimensional organization of a gene locus is important for its regulation, as recently demonstrated for the beta-globin locus. When actively expressed, the cis-regulatory elements of the beta-globin locus are in proximity in the nuclear space, forming a compartment termed the Active Chromatin Hub (ACH). However, it is unknown which proteins are involved in ACH formation. Here, we show that EKLF, an erythroid transcription factor required for adult beta-globin gene transcription, is also required for ACH formation. We conclude that transcription factors can play an essential role in the three-dimensional organization of gene loci.

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Year:  2004        PMID: 15489291      PMCID: PMC529536          DOI: 10.1101/gad.317004

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  33 in total

1.  Transcription complex stability and chromatin dynamics in vivo.

Authors:  M Wijgerde; F Grosveld; P Fraser
Journal:  Nature       Date:  1995-09-21       Impact factor: 49.962

2.  Altered DNA-binding specificity mutants of EKLF and Sp1 show that EKLF is an activator of the beta-globin locus control region in vivo.

Authors:  N Gillemans; R Tewari; F Lindeboom; R Rottier; T de Wit; M Wijgerde; F Grosveld; S Philipsen
Journal:  Genes Dev       Date:  1998-09-15       Impact factor: 11.361

3.  A shortened life span of EKLF-/- adult erythrocytes, due to a deficiency of beta-globin chains, is ameliorated by human gamma-globin chains.

Authors:  S K Lim; J J Bieker; C S Lin; F Costantini
Journal:  Blood       Date:  1997-08-01       Impact factor: 22.113

4.  A dominant chromatin-opening activity in 5' hypersensitive site 3 of the human beta-globin locus control region.

Authors:  J Ellis; K C Tan-Un; A Harper; D Michalovich; N Yannoutsos; S Philipsen; F Grosveld
Journal:  EMBO J       Date:  1996-02-01       Impact factor: 11.598

5.  Erythroid Krüppel-like factor (EKLF) is active in primitive and definitive erythroid cells and is required for the function of 5'HS3 of the beta-globin locus control region.

Authors:  R Tewari; N Gillemans; M Wijgerde; B Nuez; M von Lindern; F Grosveld; S Philipsen
Journal:  EMBO J       Date:  1998-04-15       Impact factor: 11.598

6.  The role of EKLF in human beta-globin gene competition.

Authors:  M Wijgerde; J Gribnau; T Trimborn; B Nuez; S Philipsen; F Grosveld; P Fraser
Journal:  Genes Dev       Date:  1996-11-15       Impact factor: 11.361

7.  Lethal beta-thalassaemia in mice lacking the erythroid CACCC-transcription factor EKLF.

Authors:  A C Perkins; A H Sharpe; S H Orkin
Journal:  Nature       Date:  1995-05-25       Impact factor: 49.962

8.  Defective haematopoiesis in fetal liver resulting from inactivation of the EKLF gene.

Authors:  B Nuez; D Michalovich; A Bygrave; R Ploemacher; F Grosveld
Journal:  Nature       Date:  1995-05-25       Impact factor: 49.962

9.  Analysis of mice containing a targeted deletion of beta-globin locus control region 5' hypersensitive site 3.

Authors:  B A Hug; R L Wesselschmidt; S Fiering; M A Bender; E Epner; M Groudine; T J Ley
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

10.  Targeted deletion of 5'HS2 of the murine beta-globin LCR reveals that it is not essential for proper regulation of the beta-globin locus.

Authors:  S Fiering; E Epner; K Robinson; Y Zhuang; A Telling; M Hu; D I Martin; T Enver; T J Ley; M Groudine
Journal:  Genes Dev       Date:  1995-09-15       Impact factor: 11.361

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  177 in total

Review 1.  Enhancer and promoter interactions-long distance calls.

Authors:  Ivan Krivega; Ann Dean
Journal:  Curr Opin Genet Dev       Date:  2011-12-12       Impact factor: 5.578

Review 2.  A decade of 3C technologies: insights into nuclear organization.

Authors:  Elzo de Wit; Wouter de Laat
Journal:  Genes Dev       Date:  2012-01-01       Impact factor: 11.361

Review 3.  The complex transcription regulatory landscape of our genome: control in three dimensions.

Authors:  Erik Splinter; Wouter de Laat
Journal:  EMBO J       Date:  2011-09-27       Impact factor: 11.598

Review 4.  Transcription regulation by distal enhancers: who's in the loop?

Authors:  Ralph Stadhouders; Anita van den Heuvel; Petros Kolovos; Ruud Jorna; Kris Leslie; Frank Grosveld; Eric Soler
Journal:  Transcription       Date:  2012-07-01

Review 5.  Organization of transcription.

Authors:  Lyubomira Chakalova; Peter Fraser
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-28       Impact factor: 10.005

6.  KLF1 regulates BCL11A expression and gamma- to beta-globin gene switching.

Authors:  Dewang Zhou; Kaimao Liu; Chiao-Wang Sun; Kevin M Pawlik; Tim M Townes
Journal:  Nat Genet       Date:  2010-08-01       Impact factor: 38.330

7.  Severe anemia in the Nan mutant mouse caused by sequence-selective disruption of erythroid Kruppel-like factor.

Authors:  Miroslawa Siatecka; Kenneth E Sahr; Sabra G Andersen; Mihaly Mezei; James J Bieker; Luanne L Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

8.  BRG1 requirement for long-range interaction of a locus control region with a downstream promoter.

Authors:  Shin-Il Kim; Scott J Bultman; Christine M Kiefer; Ann Dean; Emery H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-26       Impact factor: 11.205

9.  Novel role for EKLF in megakaryocyte lineage commitment.

Authors:  Pilar Frontelo; Deepa Manwani; Mariann Galdass; Holger Karsunky; Felix Lohmann; Patrick G Gallagher; James J Bieker
Journal:  Blood       Date:  2007-08-22       Impact factor: 22.113

Review 10.  EKLF/KLF1, a tissue-restricted integrator of transcriptional control, chromatin remodeling, and lineage determination.

Authors:  Yvette Y Yien; James J Bieker
Journal:  Mol Cell Biol       Date:  2012-10-22       Impact factor: 4.272

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