Literature DB >> 20223210

Conservation and variation of structural flexibility in protein families.

Adam W Van Wynsberghe, Qiang Cui.   

Abstract

In this issue, Raimondi et al. (2010) obtained interesting insights concerning structural flexibilities in the Ras superfamily that are essential to both function retention and specialization by analyzing the deformation patterns from physical models of protein structure and from crystal structures of homologous proteins.

Entities:  

Year:  2010        PMID： 20223210      PMCID： PMC2846813          DOI： 10.1016/j.str.2010.02.001

Source DB:  PubMed          Journal:  Structure        ISSN： 0969-2126            Impact factor:   5.006


  8 in total

1.  Simplified normal mode analysis of conformational transitions in DNA-dependent polymerases: the elastic network model.

Authors:  M Delarue; Y-H Sanejouand
Journal:  J Mol Biol       Date:  2002-07-26       Impact factor: 5.469

2.  Normal-mode analysis suggests protein flexibility modulation throughout RNA polymerase's functional cycle.

Authors:  Adam Van Wynsberghe; Guohui Li; Qiang Cui
Journal:  Biochemistry       Date:  2004-10-19       Impact factor: 3.162

Review 3.  Symmetry, form, and shape: guiding principles for robustness in macromolecular machines.

Authors:  Florence Tama; Charles L Brooks
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

4.  Close correspondence between the motions from principal component analysis of multiple HIV-1 protease structures and elastic network modes.

Authors:  Lei Yang; Guang Song; Alicia Carriquiry; Robert L Jernigan
Journal:  Structure       Date:  2008-02       Impact factor: 5.006

Review 5.  Long-timescale molecular dynamics simulations of protein structure and function.

Authors:  John L Klepeis; Kresten Lindorff-Larsen; Ron O Dror; David E Shaw
Journal:  Curr Opin Struct Biol       Date:  2009-04-08       Impact factor: 6.809

Review 6.  Protein dynamism and evolvability.

Authors:  Nobuhiko Tokuriki; Dan S Tawfik
Journal:  Science       Date:  2009-04-10       Impact factor: 47.728

Review 7.  Sending signals dynamically.

Authors:  Robert G Smock; Lila M Gierasch
Journal:  Science       Date:  2009-04-10       Impact factor: 47.728

Review 8.  Targeting RAS signalling pathways in cancer therapy.

Authors:  Julian Downward
Journal:  Nat Rev Cancer       Date:  2003-01       Impact factor: 60.716
  8 in total
  3 in total

1.  Nucleotide binding switches the information flow in ras GTPases.

Authors:  Francesco Raimondi; Guillem Portella; Modesto Orozco; Francesca Fanelli
Journal:  PLoS Comput Biol       Date:  2011-03-03       Impact factor: 4.475

2.  WEBnm@ v2.0: Web server and services for comparing protein flexibility.

Authors:  Sandhya P Tiwari; Edvin Fuglebakk; Siv M Hollup; Lars Skjærven; Tristan Cragnolini; Svenn H Grindhaug; Kidane M Tekle; Nathalie Reuter
Journal:  BMC Bioinformatics       Date:  2014-12-30       Impact factor: 3.169

3.  webPSN v2.0: a webserver to infer fingerprints of structural communication in biomacromolecules.

Authors:  Angelo Felline; Michele Seeber; Francesca Fanelli
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 16.971
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.