| Literature DB >> 20202440 |
Brett A Sponseller1, Erin Strait, Albert Jergens, Jessie Trujillo, Karen Harmon, Leo Koster, Melinda Jenkins-Moore, Mary Killian, Sabrina Swenson, Holly Bender, Ken Waller, Kristina Miles, Tracy Pearce, Kyoung Jin Yoon, Peter Nara.
Abstract
Influenza A pandemic (H1N1) 2009 virus continues to rapidly spread worldwide. In 2009, pandemic (H1N1) 2009 infection in a domestic cat from Iowa was diagnosed by a novel PCR assay that distinguishes between Eurasian and North American pandemic (H1N1) 2009 virus matrix genes. Human-to-cat transmission is presumed.Entities:
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Year: 2010 PMID: 20202440 PMCID: PMC3322044 DOI: 10.3201/eid1603.091737
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
FigureRadiographs of the thorax of a cat with confirmed influenza A pandemic (H1N1) 2009 virus infection. A) Right lateral view; B) dorsoventral view. Asymmetric soft tissue opacities are evident in the right and left caudal lung lobes. An alveolar pattern, composed of air bronchograms with border-effaced (indistinct) adjacent pulmonary vessels, is most pronounced in the left caudal lobe. A small gas lucency in the pleural space appears in the right caudal and dorsal thoracic cavity. An endotracheal tube is visible at the thoracic inlet on the lateral view in this moderately obese cat. L, left.
Oligonucleotide sequences for primers and probes and dye labels used in novel molecular testing for pandemic (H1N1) 2009 virus, Iowa State University Veterinary Diagnostic Laboratory, Ames, Iowa, USA, 2009*
| Name | Sequence (5′ → 3′) | Description |
|---|---|---|
| Influenza A NP screening assay | ||
| SIVRTF | CGGACGAAAAGGCAACGA | NP forward primer |
| SIVRTR | CTGCATTGTCTCCGAAGAAATAAG | NP reverse primer |
| SIVRTP | CCGATCGTGCCYTC | NP probe, MGB FAM |
| Pandemic influenza M differentiation assay | ||
| M_F | TCAGGCCCCCTCAAAGC | M forward primer |
| M_R1 | CATTCCATGAGAGCCTCAAGATC | M reverse primer 1 |
| M_R1a | CACTCCATGAGAGCCTCAAGATC | M reverse primer 2 |
| M_R1b | CATTCCATGAGTGCCTCAAGATC | M reverse primer 3 |
| M_EUPr | CAGAGACTGGAAAGTGT | EU M MGB, VIC |
| M_NAPr | CAGAGACTYGAAGAYGT | NA M MGB, FAM |
*Primers and MGB probes were obtained from Integrated DNA Technologies (Coralville, IA, USA) and Applied Biosystems Inc. (Foster City, CA, USA), respectively. SIV, swine influenza virus; NP, nucleoprotein; M, matrix.
Oligonucleotide sequences for primers and probes and dye labels used in confirmatory molecular testing for pandemic (H1N1) 2009 virus, National Veterinary Services Laboratories, Ames, Iowa, USA, 2009*
| Name | Sequence (5′ → 3′) | Description |
|---|---|---|
| Influenza A M screening assay | ||
| M+25 | AGATGAGTCTTCTAACCGAGGTCG | AI M forward primer |
| M-124 | TGCAAAAACATCTTCAAGTCTCTG | AI M reverse primer |
| M-124siv | TGCAAAGACACTTTCCAGTCTCTG | H1N1 M reverse primer |
*Primers and probes were obtained from Integrated DNA Technologies (Coralville, IA, USA) and Biosearch Technologies, Inc. (Novato, CA, USA), respectively. M, matrix; AI, avian influenza; N, neuraminidase.