Literature DB >> 2018480

Quantitative analysis of metabolic regulation. A graph-theoretic approach using spanning trees.

A K Sen1.   

Abstract

A graph-theoretic technique using spanning trees is described for the evaluation of Flux Control Coefficients of metabolic pathways. The technique is illustrated by investigating a linear pathway (a) in the absence of feedback and feedforward regulation. (b) with its first enzyme inhibited by the end product and (c) with multiple feedback loops. It is shown that the Flux Control Coefficients of a linear pathway with one or more feedback loops can be derived in a systematic manner by superimposing the effect of the feedback loop(s) on the expressions pertaining to the Flux Control Coefficients of the unregulated pathway.

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Year:  1991        PMID: 2018480      PMCID: PMC1150040          DOI: 10.1042/bj2750253

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  17 in total

Review 1.  Use of implicit methods from general sensitivity theory to develop a systematic approach to metabolic control. II. Complex systems.

Authors:  M Cascante; R Franco; E I Canela
Journal:  Math Biosci       Date:  1989-06       Impact factor: 2.144

2.  Control-pattern analysis of metabolic pathways. Flux and concentration control in linear pathways.

Authors:  J H Hofmeyr
Journal:  Eur J Biochem       Date:  1989-12-08

3.  The derivation and interpretation of control coefficients.

Authors:  B Crabtree; E A Newsholme
Journal:  Biochem J       Date:  1987-10-01       Impact factor: 3.857

4.  A linear steady-state treatment of enzymatic chains. General properties, control and effector strength.

Authors:  R Heinrich; T A Rapoport
Journal:  Eur J Biochem       Date:  1974-02-15

5.  Biochemical systems analysis. I. Some mathematical properties of the rate law for the component enzymatic reactions.

Authors:  M A Savageau
Journal:  J Theor Biol       Date:  1969-12       Impact factor: 2.691

Review 6.  A quantitative approach to metabolic control.

Authors:  B Crabtree; E A Newsholme
Journal:  Curr Top Cell Regul       Date:  1985

7.  Stability of multienzyme systems with feedback regulation: a graph theoretical approach.

Authors:  B N Goldstein; E L Shevelev
Journal:  J Theor Biol       Date:  1985-02-07       Impact factor: 2.691

8.  Sensitivity of a near-equilibrium reaction in a metabolic pathway to changes in substrate concentration.

Authors:  B Crabtree; E A Newsholme
Journal:  Eur J Biochem       Date:  1978-08-15

9.  Metabolic control and its analysis. Additional relationships between elasticities and control coefficients.

Authors:  D A Fell; H M Sauro
Journal:  Eur J Biochem       Date:  1985-05-02

10.  The control of flux.

Authors:  H Kacser; J A Burns
Journal:  Symp Soc Exp Biol       Date:  1973
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  2 in total

Review 1.  Metabolic control analysis: a survey of its theoretical and experimental development.

Authors:  D A Fell
Journal:  Biochem J       Date:  1992-09-01       Impact factor: 3.857

2.  Calculation of control coefficients of metabolic pathways. A flux-oriented graph-theoretic approach.

Authors:  A K Sen
Journal:  Biochem J       Date:  1991-10-01       Impact factor: 3.857

  2 in total

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