Literature DB >> 20166816

Entropy maximization and the spatial distribution of species.

Bart Haegeman1, Rampal S Etienne.   

Abstract

Entropy maximization (EM, also known as MaxEnt) is a general inference procedure that originated in statistical mechanics. It has been applied recently to predict ecological patterns, such as species abundance distributions and species-area relationships. It is well known in physics that the EM result strongly depends on how elementary configurations are described. Here we argue that the same issue is also of crucial importance for EM applications in ecology. To illustrate this, we focus on the EM prediction of species-level spatial abundance distributions. We show that the EM outcome depends on (1) the choice of configuration set, (2) the way constraints are imposed, and (3) the scale on which the EM procedure is applied. By varying these choices in the EM model, we obtain a large range of EM predictions. Interestingly, they correspond to spatial abundance distributions that have been derived previously from mechanistic models. We argue that the appropriate choice of the EM model assumptions is nontrivial and can be determined only by comparison with empirical data.

Mesh:

Year:  2010        PMID: 20166816     DOI: 10.1086/650718

Source DB:  PubMed          Journal:  Am Nat        ISSN: 0003-0147            Impact factor:   3.926


  9 in total

1.  Measurement scale in maximum entropy models of species abundance.

Authors:  S A Frank
Journal:  J Evol Biol       Date:  2011-01-25       Impact factor: 2.411

Review 2.  Information theory: A foundation for complexity science.

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3.  Geographical distribution modelling for Neospora caninum and Coxiella burnetii infections in dairy cattle farms in northeastern Spain.

Authors:  C Nogareda; A Jubert; V Kantzoura; M K Kouam; H Feidas; G Theodoropoulos
Journal:  Epidemiol Infect       Date:  2012-02-28       Impact factor: 4.434

4.  Biology, methodology or chance? The degree distributions of bipartite ecological networks.

Authors:  Richard J Williams
Journal:  PLoS One       Date:  2011-03-03       Impact factor: 3.240

5.  Reintegrating Biology Through the Nexus of Energy, Information, and Matter.

Authors:  Kim L Hoke; Sara L Zimmer; Adam B Roddy; Mary Jo Ondrechen; Craig E Williamson; Nicole R Buan
Journal:  Integr Comp Biol       Date:  2022-02-05       Impact factor: 3.392

6.  An empirical evaluation of four variants of a universal species-area relationship.

Authors:  Daniel J McGlinn; Xiao Xiao; Ethan P White
Journal:  PeerJ       Date:  2013-11-21       Impact factor: 2.984

7.  Assessment of habitat suitability of the snow leopard (Panthera uncia) in Qomolangma National Nature Reserve based on MaxEnt modeling.

Authors:  De-Feng Bai; Peng-Ju Chen; Luciano Atzeni; Lhaba Cering; Qian Li; Kun Shi
Journal:  Zool Res       Date:  2018-05-24

8.  Derivations of the Core Functions of the Maximum Entropy Theory of Ecology.

Authors:  Alexander B Brummer; Erica A Newman
Journal:  Entropy (Basel)       Date:  2019-07-21       Impact factor: 2.524

9.  Remarks on the Maximum Entropy Principle with Application to the Maximum Entropy Theory of Ecology.

Authors:  Marco Favretti
Journal:  Entropy (Basel)       Date:  2017-12-27       Impact factor: 2.524

  9 in total

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