Literature DB >> 20161508

Electron tunneling through sensitizer wires bound to proteins.

Matthew R Hartings1, Igor V Kurnikov, Alexander R Dunn, Jay R Winkler, Harry B Gray, Mark A Ratner.   

Abstract

We report a quantitative theoretical analysis of long-range electron transfer through sensitizer wires bound in the active-site channel of cytochrome P450cam. Each sensitizer wire consists of a substrate group with high binding affinity for the enzyme active site connected to a ruthenium-diimine through a bridging aliphatic or aromatic chain. Experiments have revealed a dramatic dependence of electron transfer rates on the chemical composition of both the bridging group and the substrate. Using combined molecular dynamics simulations and electronic coupling calculations, we show that electron tunneling through perfluorinated aromatic bridges is promoted by enhanced superexchange coupling through virtual reduced states. In contrast, electron flow through aliphatic bridges occurs by hole-mediated superexchange. We have found that a small number of wire conformations with strong donor-acceptor couplings can account for the observed electron tunneling rates for sensitizer wires terminated with either ethylbenzene or adamantane. In these instances, the rate is dependent not only on electronic coupling of the donor and acceptor but also on the nuclear motion of the sensitizer wire, necessitating the calculation of average rates over the course of a molecular dynamics simulation. These calculations along with related recent findings have made it possible to analyze the results of many other sensitizer-wire experiments that in turn point to new directions in our attempts to observe reactive intermediates in the catalytic cycles of P450 and other heme enzymes.

Entities:  

Year:  2010        PMID: 20161508      PMCID: PMC2797321          DOI: 10.1016/j.ccr.2009.08.008

Source DB:  PubMed          Journal:  Coord Chem Rev        ISSN: 0010-8545            Impact factor:   22.315


  25 in total

1.  Probing the open state of cytochrome P450cam with ruthenium-linker substrates.

Authors:  A R Dunn; I J Dmochowski; A M Bilwes; H B Gray; B R Crane
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-16       Impact factor: 11.205

2.  Dynamic nature of the intramolecular electronic coupling mediated by a solvent molecule: a computational study.

Authors:  Alessandro Troisi; Mark A Ratner; Matthew B Zimmt
Journal:  J Am Chem Soc       Date:  2004-02-25       Impact factor: 15.419

3.  A thermodynamic model of regulation: modulation of redox equilibria in camphor monoxygenase.

Authors:  S G Sligar; I C Gunsalus
Journal:  Proc Natl Acad Sci U S A       Date:  1976-04       Impact factor: 11.205

4.  Base pair motions control the rates and distance dependencies of reductive and oxidative DNA charge transfer.

Authors:  Linda Valis; Qiang Wang; Milen Raytchev; Ivan Buchvarov; Hans-Achim Wagenknecht; Torsten Fiebig
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

5.  Ab initio based calculations of electron-transfer rates in metalloproteins.

Authors:  Tatiana R Prytkova; Igor V Kurnikov; David N Beratan
Journal:  J Phys Chem B       Date:  2005-02-03       Impact factor: 2.991

6.  Luminescent ruthenium(II)- and rhenium(I)-diimine wires bind nitric oxide synthase.

Authors:  Alexander R Dunn; Wendy Belliston-Bittner; Jay R Winkler; Elizabeth D Getzoff; Dennis J Stuehr; Harry B Gray
Journal:  J Am Chem Soc       Date:  2005-04-13       Impact factor: 15.419

7.  Probing the heme-thiolate oxygenase domain of inducible nitric oxide synthase with Ru(II) and Re(I) electron tunneling wires.

Authors:  Charlotte A Whited; Wendy Belliston-Bittner; Alexander R Dunn; Jay R Winkler; Harry B Gray
Journal:  J Porphyr Phthalocyanines       Date:  2008-09-01       Impact factor: 1.811

8.  Conformational gating of the electron transfer reaction QA-.QB --> QAQB-. in bacterial reaction centers of Rhodobacter sphaeroides determined by a driving force assay.

Authors:  M S Graige; G Feher; M Y Okamura
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

9.  Cytochrome P-450cam substrate and effector interactions.

Authors:  I C Gunsalus; J R Meeks; J D Lipscomb
Journal:  Ann N Y Acad Sci       Date:  1973       Impact factor: 5.691

Review 10.  Steering electrons on moving pathways.

Authors:  David N Beratan; Spiros S Skourtis; Ilya A Balabin; Alexander Balaeff; Shahar Keinan; Ravindra Venkatramani; Dequan Xiao
Journal:  Acc Chem Res       Date:  2009-10-20       Impact factor: 22.384

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  7 in total

1.  New Ru(II) Complex for Dual Activity: Photoinduced Ligand Release and (1)O2 Production.

Authors:  Lauren M Loftus; Jessica K White; Bryan A Albani; Lars Kohler; Jeremy J Kodanko; Randolph P Thummel; Kim R Dunbar; Claudia Turro
Journal:  Chemistry       Date:  2016-01-20       Impact factor: 5.236

2.  New Ru(II) complexes for dual photoreactivity: ligand exchange and (1)O2 generation.

Authors:  Jessica D Knoll; Bryan A Albani; Claudia Turro
Journal:  Acc Chem Res       Date:  2015-07-17       Impact factor: 22.384

3.  Unusual Role of Excited State Mixing in the Enhancement of Photoinduced Ligand Exchange in Ru(II) Complexes.

Authors:  Lauren M Loftus; Ao Li; Kathlyn L Fillman; Philip D Martin; Jeremy J Kodanko; Claudia Turro
Journal:  J Am Chem Soc       Date:  2017-12-11       Impact factor: 15.419

Review 4.  Proton-coupled electron flow in protein redox machines.

Authors:  Jillian L Dempsey; Jay R Winkler; Harry B Gray
Journal:  Chem Rev       Date:  2010-11-17       Impact factor: 60.622

5.  Electron hopping through proteins.

Authors:  Jeffrey J Warren; Maraia E Ener; Antonín Vlček; Jay R Winkler; Harry B Gray
Journal:  Coord Chem Rev       Date:  2012-04-05       Impact factor: 22.315

6.  Anisotropic covalency contributions to superexchange pathways in type one copper active sites.

Authors:  Ryan G Hadt; Serge I Gorelsky; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2014-10-13       Impact factor: 15.419

7.  Redox mediators in visible light photocatalysis: photocatalytic radical thiol-ene additions.

Authors:  Elizabeth L Tyson; Zachary L Niemeyer; Tehshik P Yoon
Journal:  J Org Chem       Date:  2014-01-27       Impact factor: 4.354

  7 in total

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