Literature DB >> 9751725

Conformational gating of the electron transfer reaction QA-.QB --> QAQB-. in bacterial reaction centers of Rhodobacter sphaeroides determined by a driving force assay.

M S Graige1, G Feher, M Y Okamura.   

Abstract

The mechanism of the electron transfer reaction, QA-.QB --> QAQB-., was studied in isolated reaction centers from the photosynthetic bacterium Rhodobacter sphaeroides by replacing the native Q10 in the QA binding site with quinones having different redox potentials. These substitutions are expected to change the intrinsic electron transfer rate by changing the redox free energy (i.e., driving force) for electron transfer without affecting other events that may be associated with the electron transfer (e.g., protein dynamics or protonation). The electron transfer from QA-. to QB was measured by three independent methods: a functional assay involving cytochrome c2 to measure the rate of QA-. oxidation, optical kinetic spectroscopy to measure changes in semiquinone absorption, and kinetic near-IR spectroscopy to measure electrochromic shifts that occur in response to electron transfer. The results show that the rate of the observed electron transfer from QA-. to QB does not change as the redox free energy for electron transfer is varied over a range of 150 meV. The strong temperature dependence of the observed rate rules out the possibility that the reaction is activationless. We conclude, therefore, that the independence of the observed rate on the driving force for electron transfer is due to conformational gating, that is, the rate limiting step is a conformational change required before electron transfer. This change is proposed to be the movement, controlled kinetically either by protein dynamics or intermolecular interactions, of QB by approximately 5 A as observed in the x-ray studies of Stowell et al. [Stowell, M. H. B., McPhillips, T. M., Rees, D. C., Soltis, S. M., Abresch, E. & Feher, G. (1997) Science 276, 812-816].

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Year:  1998        PMID: 9751725      PMCID: PMC21700          DOI: 10.1073/pnas.95.20.11679

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Crystallization and X-ray structure determination of cytochrome c2 from Rhodobacter sphaeroides in three crystal forms.

Authors:  H L Axelrod; G Feher; J P Allen; A J Chirino; M W Day; B T Hsu; D C Rees
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-07-01

2.  Long-range electrostatic interaction in the bacterial photosynthetic reaction centre.

Authors:  P Maróti; D K Hanson; M Schiffer; P Sebban
Journal:  Nat Struct Biol       Date:  1995-12

3.  Kinetics of electron transfer between the primary and the secondary electron acceptor in reaction centers from Rhodopseudomonas sphaeroides.

Authors:  A Vermeglio; R K Clayton
Journal:  Biochim Biophys Acta       Date:  1977-07-07

4.  Secondary electron transfer in reaction centers of Rhodopseudomonas sphaeroides. Out-of-phase periodicity of two for the formation of ubisemiquinone and fully reduced ubiquinone.

Authors:  A Vermeglio
Journal:  Biochim Biophys Acta       Date:  1977-03-11

5.  Kinetic phases in the electron transfer from P+QA-QB to P+QAQB- and the associated processes in Rhodobacter sphaeroides R-26 reaction centers.

Authors:  J Li; D Gilroy; D M Tiede; M R Gunner
Journal:  Biochemistry       Date:  1998-03-03       Impact factor: 3.162

6.  The electronic structure of Fe2+ in reaction centers from Rhodopseudomonas sphaeroides. I. Static magnetization measurements.

Authors:  W F Butler; D C Johnston; H B Shore; D R Fredkin; M Y Okamura; G Feher
Journal:  Biophys J       Date:  1980-12       Impact factor: 4.033

7.  Calculated coupling of electron and proton transfer in the photosynthetic reaction center of Rhodopseudomonas viridis.

Authors:  C R Lancaster; H Michel; B Honig; M R Gunner
Journal:  Biophys J       Date:  1996-06       Impact factor: 4.033

8.  Iron-depleted reaction centers from Rhodopseudomonas sphaeroides R-26.1: characterization and reconstitution with Fe2+, Mn2+, Co2+, Ni2+, Cu2+, and Zn2+.

Authors:  R J Debus; G Feher; M Y Okamura
Journal:  Biochemistry       Date:  1986-04-22       Impact factor: 3.162

9.  Distant electrostatic interactions modulate the free energy level of QA- in the photosynthetic reaction center.

Authors:  J Miksovska; P Maróti; J Tandori; M Schiffer; D K Hanson; P Sebban
Journal:  Biochemistry       Date:  1996-12-03       Impact factor: 3.162

10.  Electron acceptors of bacterial photosynthetic reaction centers. II. H+ binding coupled to secondary electron transfer in the quinone acceptor complex.

Authors:  C A Wraight
Journal:  Biochim Biophys Acta       Date:  1979-11-08
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  48 in total

1.  Photosynthetic electron transfer controlled by protein relaxation: analysis by Langevin stochastic approach.

Authors:  D A Cherepanov; L I Krishtalik; A Y Mulkidjanian
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

2.  Electron transfer kinetics in photosynthetic reaction centers embedded in trehalose glasses: trapping of conformational substates at room temperature.

Authors:  Gerardo Palazzo; Antonia Mallardi; Alejandro Hochkoeppler; Lorenzo Cordone; Giovanni Venturoli
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

3.  Leucine 41 is a gate for water entry in the reduction of Clostridium pasteurianum rubredoxin.

Authors:  T Min; C E Ergenekan; M K Eidsness; T Ichiye; C Kang
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

4.  Self-regulation phenomena in bacterial reaction centers. I. General theory.

Authors:  A O Goushcha; V N Kharkyanen; G W Scott; A R Holzwarth
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

5.  Cumulant analysis of charge recombination kinetics in bacterial reaction centers reconstituted into lipid vesicles.

Authors:  G Palazzo; A Mallardi; M Giustini; D Berti; G Venturoli
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

6.  Identification of the proton pathway in bacterial reaction centers: inhibition of proton transfer by binding of Zn2+ or Cd2+.

Authors:  M L Paddock; M S Graige; G Feher; M Y Okamura
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

7.  The position of QB in the photosynthetic reaction center depends on pH: a theoretical analysis of the proton uptake upon QB reduction.

Authors:  Antoine Taly; Pierre Sebban; Jeremy C Smith; G Matthias Ullmann
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

8.  Residual water modulates QA- -to-QB electron transfer in bacterial reaction centers embedded in trehalose amorphous matrices.

Authors:  Francesco Francia; Gerardo Palazzo; Antonia Mallardi; Lorenzo Cordone; Giovanni Venturoli
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

Review 9.  Thermochemistry of proton-coupled electron transfer reagents and its implications.

Authors:  Jeffrey J Warren; Tristan A Tronic; James M Mayer
Journal:  Chem Rev       Date:  2010-10-06       Impact factor: 60.622

10.  The fe2+ site of photosynthetic reaction centers probed by multiple scattering x-ray absorption fine structure spectroscopy: improving structure resolution in dry matrices.

Authors:  Giulia Veronesi; Lisa Giachini; Francesco Francia; Antonia Mallardi; Gerardo Palazzo; Federico Boscherini; Giovanni Venturoli
Journal:  Biophys J       Date:  2008-05-02       Impact factor: 4.033

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