Literature DB >> 20159155

Partitioning of nonsteroidal antiinflammatory drugs in lipid membranes: a molecular dynamics simulation study.

Mohan Babu Boggara1, Ramanan Krishnamoorti.   

Abstract

Using the potential of mean constrained force method, molecular dynamics simulations with atomistic details were performed to examine the partitioning and nature of interactions of two nonsteroidal antiinflammatory drugs, namely aspirin and ibuprofen, in bilayers of dipalmitoylphosphatidylcholine. Two charge states (neutral and anionic) of the drugs were simulated to understand the effect of protonation or pH on drug partitioning. Both drugs, irrespective of their charge state, were found to have high partition coefficients in the lipid bilayer from water. However, the values and trends of the free energy change and the location of the minima in the bilayer are seen to be influenced by the drug structure and charge state. In the context of the transport of the drugs through the bilayer, the charged forms were found to permeate fully hydrated in contrast to the neutral forms that permeate unhydrated. Copyright 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20159155      PMCID: PMC2820636          DOI: 10.1016/j.bpj.2009.10.046

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  42 in total

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2.  Simulation of pore formation in lipid bilayers by mechanical stress and electric fields.

Authors:  D Peter Tieleman; Hari Leontiadou; Alan E Mark; Siewert-Jan Marrink
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4.  Nucleation free energy of pore formation in an amphiphilic bilayer studied by molecular dynamics simulations.

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Journal:  J Chem Phys       Date:  2004-12-15       Impact factor: 3.488

5.  Ion transport across transmembrane pores.

Authors:  Hari Leontiadou; Alan E Mark; Siewert-Jan Marrink
Journal:  Biophys J       Date:  2007-03-23       Impact factor: 4.033

6.  A molecular-dynamics study of lipid bilayers: effects of the hydrocarbon chain length on permeability.

Authors:  Taisuke Sugii; Shu Takagi; Yoichiro Matsumoto
Journal:  J Chem Phys       Date:  2005-11-08       Impact factor: 3.488

7.  Thermodynamics of hydrogen bonding in hydrophilic and hydrophobic media.

Authors:  David van der Spoel; Paul J van Maaren; Per Larsson; Nicusor Tîmneanu
Journal:  J Phys Chem B       Date:  2006-03-09       Impact factor: 2.991

8.  The relationship between permeant size and permeability in lipid bilayer membranes.

Authors:  T X Xiang; B D Anderson
Journal:  J Membr Biol       Date:  1994-06       Impact factor: 1.843

9.  Diffusion of arylpropionate non-steroidal anti-inflammatory drugs into the cerebrospinal fluid: a quantitative structure-activity relationship approach.

Authors:  Fabienne Péhourcq; Myriam Matoga; Bernard Bannwarth
Journal:  Fundam Clin Pharmacol       Date:  2004-02       Impact factor: 2.748

10.  Permeation across hydrated DPPC lipid bilayers: simulation of the titrable amphiphilic drug valproic acid.

Authors:  Johan Ulander; A D J Haymet
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

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  27 in total

1.  Partitioning and localization of environment-sensitive 2-(2'-pyridyl)- and 2-(2'-pyrimidyl)-indoles in lipid membranes: a joint refinement using fluorescence measurements and molecular dynamics simulations.

Authors:  Alexander Kyrychenko; Feiyue Wu; Randolph P Thummel; Jacek Waluk; Alexey S Ladokhin
Journal:  J Phys Chem B       Date:  2010-10-28       Impact factor: 2.991

2.  Drug permeability prediction using PMF method.

Authors:  Fancui Meng; Weiren Xu
Journal:  J Mol Model       Date:  2012-10-27       Impact factor: 1.810

3.  Cyclooxygenase-2 catalysis and inhibition in lipid bilayer nanodiscs.

Authors:  Benjamin J Orlando; Daniel R McDougle; Michael J Lucido; Edward T Eng; Leigh Ann Graham; Claus Schneider; David L Stokes; Aditi Das; Michael G Malkowski
Journal:  Arch Biochem Biophys       Date:  2014-02-03       Impact factor: 4.013

4.  A method to predict blood-brain barrier permeability of drug-like compounds using molecular dynamics simulations.

Authors:  Timothy S Carpenter; Daniel A Kirshner; Edmond Y Lau; Sergio E Wong; Jerome P Nilmeier; Felice C Lightstone
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

Review 5.  Experimental and theoretical studies of emodin interacting with a lipid bilayer of DMPC.

Authors:  Antonio R da Cunha; Evandro L Duarte; Hubert Stassen; M Teresa Lamy; Kaline Coutinho
Journal:  Biophys Rev       Date:  2017-09-22

6.  Structural effects and translocation of doxorubicin in a DPPC/Chol bilayer: the role of cholesterol.

Authors:  Tyrone J Yacoub; Allam S Reddy; Igal Szleifer
Journal:  Biophys J       Date:  2011-07-20       Impact factor: 4.033

7.  Effects of protein binding on a lipid bilayer containing local anesthetic articaine, and the potential of mean force calculation: a molecular dynamics simulation approach.

Authors:  Sepideh Amjad-Iranagh; Abbas Yousefpour; Parto Haghighi; Hamid Modarress
Journal:  J Mol Model       Date:  2013-06-25       Impact factor: 1.810

8.  Naratriptan aggregation in lipid bilayers: perspectives from molecular dynamics simulations.

Authors:  Irene Wood; Mónica Pickholz
Journal:  J Mol Model       Date:  2016-08-24       Impact factor: 1.810

9.  Atomistic simulation of lipid and DiI dynamics in membrane bilayers under tension.

Authors:  Hari S Muddana; Ramachandra R Gullapalli; Evangelos Manias; Peter J Butler
Journal:  Phys Chem Chem Phys       Date:  2010-12-09       Impact factor: 3.676

Review 10.  Back to the future: can physical models of passive membrane permeability help reduce drug candidate attrition and move us beyond QSPR?

Authors:  Robert V Swift; Rommie E Amaro
Journal:  Chem Biol Drug Des       Date:  2013-01       Impact factor: 2.817

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