Literature DB >> 20159017

Recognition of cellooligosaccharides by a family 28 carbohydrate-binding module.

Kazuhide Tsukimoto1, Rie Takada, Yuko Araki, Kentaro Suzuki, Shuichi Karita, Takayoshi Wakagi, Hirofumi Shoun, Takashi Watanabe, Shinya Fushinobu.   

Abstract

The crystal structures of a carbohydrate-binding module (CBM) family 28 domain of endoglucanase Cel5A from Clostridium josui have been determined in ligand-free and complex forms with cellobiose, cellotetraose, and cellopentaose as the first complex structures of this family. In the cleft of a beta-sandwich fold, the ligands are recognized by stacking interactions and hydrogen bonds. Conformations of the bound cellooligosaccharides are similar to those in crystals and solution but clearly different from the cellulose structure. Interestingly, the glucan chain bound on CBM28 is in the opposite direction of that bound to CBM17, although these families share significant structural similarity. Copyright 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20159017     DOI: 10.1016/j.febslet.2010.02.027

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  7 in total

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Authors:  He Li; Jie Sun; Fan Yang; Xiaoyu Guo; Xinyu Zhang; Min Tao; Xiaoyi Chen; Xianzhen Li
Journal:  Appl Environ Microbiol       Date:  2019-01-09       Impact factor: 4.792

2.  S-layer homology domain proteins Csac_0678 and Csac_2722 are implicated in plant polysaccharide deconstruction by the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus.

Authors:  Inci Ozdemir; Sara E Blumer-Schuette; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2011-12-02       Impact factor: 4.792

3.  Structural basis for entropy-driven cellulose binding by a type-A cellulose-binding module (CBM) and bacterial expansin.

Authors:  Nikolaos Georgelis; Neela H Yennawar; Daniel J Cosgrove
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-27       Impact factor: 11.205

4.  Towards automated crystallographic structure refinement with phenix.refine.

Authors:  Pavel V Afonine; Ralf W Grosse-Kunstleve; Nathaniel Echols; Jeffrey J Headd; Nigel W Moriarty; Marat Mustyakimov; Thomas C Terwilliger; Alexandre Urzhumtsev; Peter H Zwart; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16

5.  Cellulose-specific Type B carbohydrate binding modules: understanding oligomeric and non-crystalline substrate recognition mechanisms.

Authors:  Abhishek A Kognole; Christina M Payne
Journal:  Biotechnol Biofuels       Date:  2018-11-30       Impact factor: 6.040

6.  Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont.

Authors:  Alexandra S Tauzin; Kurt J Kwiatkowski; Nicole I Orlovsky; Christopher J Smith; A Louise Creagh; Charles A Haynes; Zdzislaw Wawrzak; Harry Brumer; Nicole M Koropatkin
Journal:  MBio       Date:  2016-04-26       Impact factor: 7.867

7.  Cel5I, a SLH-Containing Glycoside Hydrolase: Characterization and Investigation on Its Role in Ruminiclostridium cellulolyticum.

Authors:  Nathalie Franche; Chantal Tardif; Julie Ravachol; Seddik Harchouni; Pierre-Henri Ferdinand; Romain Borne; Henri-Pierre Fierobe; Stéphanie Perret
Journal:  PLoS One       Date:  2016-08-08       Impact factor: 3.240

  7 in total

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