Literature DB >> 20147747

Beyond the canonical 20 amino acids: expanding the genetic lexicon.

Travis S Young1, Peter G Schultz.   

Abstract

The ability to genetically encode unnatural amino acids beyond the common 20 has allowed unprecedented control over the chemical structures of recombinantly expressed proteins. Orthogonal aminoacyl-tRNA synthetase/tRNA pairs have been used together with nonsense, rare, or 4-bp codons to incorporate >50 unnatural amino acids into proteins in Escherichia coli, Saccharomyces cerevisiae, Pichia pastoris, and mammalian cell lines. This has allowed the expression of proteins containing amino acids with novel side chains, including fluorophores, post-translational modifications, metal ion chelators, photocaged and photocross-linking moieties, uniquely reactive functional groups, and NMR, IR, and x-ray crystallographic probes.

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Year:  2010        PMID: 20147747      PMCID: PMC2856976          DOI: 10.1074/jbc.R109.091306

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  60 in total

1.  A general method for site-specific incorporation of unnatural amino acids into proteins.

Authors:  C J Noren; S J Anthony-Cahill; M C Griffith; P G Schultz
Journal:  Science       Date:  1989-04-14       Impact factor: 47.728

2.  In vivo incorporation of an alkyne into proteins in Escherichia coli.

Authors:  Alexander Deiters; Peter G Schultz
Journal:  Bioorg Med Chem Lett       Date:  2005-03-01       Impact factor: 2.823

3.  A genetically encoded photocaged tyrosine.

Authors:  Alexander Deiters; Dan Groff; Youngha Ryu; Jianming Xie; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2006-04-21       Impact factor: 15.336

4.  Engineering a tRNA and aminoacyl-tRNA synthetase for the site-specific incorporation of unnatural amino acids into proteins in vivo.

Authors:  D R Liu; T J Magliery; M Pastrnak; P G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

5.  Nicotinic receptor binding site probed with unnatural amino acid incorporation in intact cells.

Authors:  M W Nowak; P C Kearney; J R Sampson; M E Saks; C G Labarca; S K Silverman; W Zhong; J Thorson; J N Abelson; N Davidson
Journal:  Science       Date:  1995-04-21       Impact factor: 47.728

6.  Protein photo-cross-linking in mammalian cells by site-specific incorporation of a photoreactive amino acid.

Authors:  Nobumasa Hino; Yuko Okazaki; Takatsugu Kobayashi; Akiko Hayashi; Kensaku Sakamoto; Shigeyuki Yokoyama
Journal:  Nat Methods       Date:  2005-02-17       Impact factor: 28.547

7.  A genetically encoded photocaged amino acid.

Authors:  Ning Wu; Alexander Deiters; T Ashton Cropp; David King; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2004-11-10       Impact factor: 15.419

8.  The incorporation of a photoisomerizable amino acid into proteins in E. coli.

Authors:  Mohua Bose; Dan Groff; Jianming Xie; Eric Brustad; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2006-01-18       Impact factor: 15.419

9.  Structural plasticity of an aminoacyl-tRNA synthetase active site.

Authors:  James M Turner; James Graziano; Glen Spraggon; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-17       Impact factor: 11.205

10.  Efficient incorporation of unnatural amino acids into proteins in Escherichia coli.

Authors:  Youngha Ryu; Peter G Schultz
Journal:  Nat Methods       Date:  2006-04       Impact factor: 28.547

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  89 in total

1.  Membrane trafficking of the bacterial adhesin GspB and the accessory Sec transport machinery.

Authors:  Cierra Spencer; Barbara A Bensing; Nagendra N Mishra; Paul M Sullam
Journal:  J Biol Chem       Date:  2018-12-04       Impact factor: 5.157

2.  α-Helical element at the hormone-binding surface of the insulin receptor functions as a signaling element to activate its tyrosine kinase.

Authors:  Jonathan Whittaker; Linda J Whittaker; Charles T Roberts; Nelson B Phillips; Faramarz Ismail-Beigi; Michael C Lawrence; Michael A Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-26       Impact factor: 11.205

Review 3.  Residue-specific incorporation of non-canonical amino acids into proteins: recent developments and applications.

Authors:  Jeremiah A Johnson; Ying Y Lu; James A Van Deventer; David A Tirrell
Journal:  Curr Opin Chem Biol       Date:  2010-11-09       Impact factor: 8.822

4.  An evolved aminoacyl-tRNA synthetase with atypical polysubstrate specificity.

Authors:  Douglas D Young; Travis S Young; Michael Jahnz; Insha Ahmad; Glen Spraggon; Peter G Schultz
Journal:  Biochemistry       Date:  2011-02-01       Impact factor: 3.162

Review 5.  Nonproteinogenic amino acid building blocks for nonribosomal peptide and hybrid polyketide scaffolds.

Authors:  Christopher T Walsh; Robert V O'Brien; Chaitan Khosla
Journal:  Angew Chem Int Ed Engl       Date:  2013-05-31       Impact factor: 15.336

6.  Using protein backbone mutagenesis to dissect the link between ion occupancy and C-type inactivation in K+ channels.

Authors:  Kimberly Matulef; Alexander G Komarov; Corey A Costantino; Francis I Valiyaveetil
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-15       Impact factor: 11.205

7.  Genetically Encoded Cholesterol-Modified Polypeptides.

Authors:  Davoud Mozhdehi; Kelli M Luginbuhl; Michael Dzuricky; Simone A Costa; Sinan Xiong; Fred C Huang; Mae M Lewis; Stephanie R Zelenetz; Christian D Colby; Ashutosh Chilkoti
Journal:  J Am Chem Soc       Date:  2019-01-04       Impact factor: 15.419

8.  Site-specific nitration of apolipoprotein A-I at tyrosine 166 is both abundant within human atherosclerotic plaque and dysfunctional.

Authors:  Joseph A DiDonato; Kulwant Aulak; Ying Huang; Matthew Wagner; Gary Gerstenecker; Celalettin Topbas; Valentin Gogonea; Anthony J DiDonato; W H Wilson Tang; Ryan A Mehl; Paul L Fox; Edward F Plow; Jonathan D Smith; Edward A Fisher; Stanley L Hazen
Journal:  J Biol Chem       Date:  2014-02-20       Impact factor: 5.157

Review 9.  Engineered antibodies for molecular imaging of cancer.

Authors:  Anna M Wu
Journal:  Methods       Date:  2013-10-01       Impact factor: 3.608

10.  Expanding the scope of alkyne-mediated bioconjugations utilizing unnatural amino acids.

Authors:  Johnathan C Maza; Zachary M Nimmo; Douglas D Young
Journal:  Chem Commun (Camb)       Date:  2016-01-04       Impact factor: 6.222

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