| Literature DB >> 20098596 |
Jason C Kwan1, Kanchan Taori, Valerie J Paul, Hendrik Luesch.
Abstract
Investigation of an extract from the marine cyanobacteriumEntities:
Keywords: Lyngbya semiplena; cyanobacteria; cyclic depsipeptides; elastase inhibitors; lyngbyastatins
Mesh:
Substances:
Year: 2009 PMID: 20098596 PMCID: PMC2810234 DOI: 10.3390/md7040528
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1.Structures of lyngbyastatins 4–7 and compounds 1–3.
NMR Spectral Data for Lyngbyastatin 8–10 (1–3) in DMSO-d6 at 600 MHz (1H).
| 1 | ||||||
| 2 | 4.64, br | 55.9, d | 4.62, m | 55.9, d | 4.60, m | 56.2, d |
| 3 | 2.05, m | 30.4, d | 2.05, m | 30.3, d | 2.03, m | 30.4, d |
| 4 | 0.86, d (6.6) | 19.0, q | 0.85 | 18.9, q | 0.86, d (7.0) | 19.0, q |
| 5 | 0.74, d (6.6) | 17.2, q | 0.74, d (6.6) | 17.1, q | 0.74, d (7.0) | 17.2, q |
| NH | 7.50, br d (6.3) | 7.52, br d (6.8) | 7.52, br d (7.3) | |||
| 6 | ||||||
| 7 | 4.87, dd (11.8, 1.9) | 60.6, d | 4.87, dd (12.0, 0) | 60.5, d | 4.86, dd (12.0, 2.4) | 60.6, d |
| 8a | 3.08, dd (−13.4, 1.9) | 32.5, t | 3.08, dd (−13.0, 0) | 32.4, t | 3.08, dd (−13.6, 2.4) | 32.2, t |
| 8b | 2.69, dd (−13.4, 11.8) | 2.69, dd (−13.0, 12.2) | 2.72, dd (−13.6, 12..0) | |||
| 9 | 127.3, s | 127.2, s | ||||
| 10 | 6.97, d (8.0) | 130.3, d | 6.97, d (7.6) | 130.2, d | 7.25, s | 133.4, d |
| 11 | 6.76, d (8.0) | 115.2, d | 6.76, d (7.6) | 115.1, d | ||
| 12 | 156.2, s | 156.0, s | ||||
| 13 | 6.76, d (8.0) | 115.2, d | 6.76, d (7.6) | 115.1, d | 6.93, d (8.2) | 116.5, d |
| 14 | 6.97, d (8.0) | 130.3, d | 6.97, d (7.6) | 130.2, d | 6.97, d (8.2) | 130.0, d |
| 15 | 2.74, s | 30.2, q | 2.74, s | 30.1, q | 2.75, s | 30.3, q |
| OH | 9.38, s | 9.41, s | 8.48, s | |||
| 16 | 170.6, s | 170.3, s | ||||
| 17 | 4.71, dd (12.1, 3.1) | 50.0, d | 4.71, dd (12.1, 3.0) | 49.9, d | 4.70, dd (11.7, 3.2) | 50.2, d |
| 18a | 2.86, dd (−12.8, 12.1) | 35.0, t | 2.85, dd (−12.8, 12.1) | 35.0, t | 2.88, dd (−13.7, 11.7) | 35.2, t |
| 18b | 1.80, dd (−12.8, 3.1) | 1.80, dd (−12.8, 3.0) | 1.87, dd (−13.7, 3.2) | |||
| 19 | 136.8, s | 136.5, s | ||||
| 20/24 | 6.82, d (7.2) | 129.3, d | 6.82, d (7.3) | 129.2, d | 6.78, d (7.4) | 129.5, d |
| 21/23 | 7.18, m | 127.7, d | 7.18, m | 127.6, d | 7.16, dd (7.4, 7.3) | 128.0, d |
| 22 | 7.14, m | 126.1, d | 7.14, m | 126.0, d | 7.13, t (7.3) | 126.4, d |
| 25 | 168.5, s | |||||
| 26 | 3.77, ddd (12.4, 9.2, 2.4) | 47.9, d | 3.77, ddd (14.1, 10.6, 2.3) | 47.9, d | 3.78, ddd (11.6, 8.8, 2.2) | 48.2, d |
| 27a | 2.40, dddd (−12.4, 12.4, 11.7, 2.7) | 21.7, t | 2.40, dddd (14.1, −12.4, 11.3, 4.4) | 21.6, t | 2.40, m | 21.8, t |
| 27b | 1.56, m | 1.56, m | 1.56, m | |||
| 28a | 1.70, br d (11.7) | 29.1, t | 1.71, br d (11.3) | 29.0, t | 1.71, br d (12.4) | 29.2, t |
| 28b | 1.56, m | 1.55, m | 1.57, m | |||
| 29 | 5.06, s | 73.5, d | 5.06, s | 73.4, s | 5.07, s | 73.7, d |
| NH | 7.21, d (9.2) | 7.21, br | 7.21, br | |||
| OH | 6.10, s | 6.11, br | 3.15, s | |||
| 30 | 162.7, s | |||||
| 31 | 130.1, s | 129.7, s | ||||
| 32 | 6.49, q (6.8) | 131.6, d | 6.49, q (6.8) | 131.5, d | 6.50, q | 132.1, d |
| 33 | 1.47, d (6.8) | 12.9, q | 1.47, d (6.8) | 12.8, q | 1.47, d | 12.9, q |
| NH | 6.56, s | 6.58, s | ||||
| 34 | ||||||
| 35 | 4.62, m | 55.1, d | 4.63, m | 55.0, d | 4.61, m | 55.7, d |
| 36 | 5.53, br | 71.4, d | 5.53, br | 71.4, d | 5.50, br | |
| 37 | 1.21, d (6.2) | 17.6, q | 1.21, d (6.2) | 17.6, q | 1.21, d (6.7) | 17.8, q |
| NH | 7.91, br | 7.92, br | 7.92, br | |||
| 38 | 171.7, s | |||||
| 39 | 4.36, m | 57.0, d | 4.37, m | 56.8, d | 4.36, dd (8.8, 6.1) | 57.1, d |
| 40 | 2.05, m | 30.4, d | 2.05, m | 30.3, d | 2.03, m | 30.4, d |
| 41 | 0.85, d (6.2) | 19.0, q | 0.84 | 13.3, q | 0.85, d (6.1) | 19.0, q |
| 42 | 0.80, d (6.4) | 17.5, q | 0.80, d (6.5) | 17.4, q | 0.80, d (6.6) | 17.5, q |
| NH | 7.77, br | 7.69, br | 7.68, br | |||
| 43 | 172.5, s | 172.3, s | ||||
| 44 | 4.33, dq (7.4, 6.7) | 47.8, d | 4.34, dq (7.2, 6.8) | 47.7, d | 4.32, dq (7.6, 7.0) | 47.9, d |
| 45 | 1.17, d (6.7) | 17.8, q | 1.18, d (6.8) | 17.6, q | 1.18, d (7.0) | 17.8, q |
| NH | 8.08, d (7.4) | 8.04, d (7.2) | 8.01, d (7.6) | |||
| 46 | 169.0, s | 171.8, s | ||||
| 47 | 1.82, s | 22.2, q | 2.07, m (2H) | 36.7, t | 2.07, m (2H) | 36.8, t |
| 48 | 1.48, m (2H) | 18.3, t | 1.48, m (2H) | 18.5, t | ||
| 49 | 0.83 | 13.3, q | 0.83, t (7.3) | 13.4, q | ||
Deduced from edited HSQC.
Protons showing HMBC correlations to the indicated carbon.
Could not be detected due to lack of HMBC correlation.
The multiplicity of these signals could not be deduced due to signal overlap.
Assigned by default as no COSY correlations were observed. Chemical shift is different to 1 and 2 probably because of different sample concentrations (data for 1 and 2 were acquired with a 1-mm probe and therefore they were much more concentrated).
Figure 2.ESIMS fragmentation pattern for lyngbyastatins 8–10 (1–3). Two series of b ions were observed. In one (top), ring opening at the ester bond occurred, followed by sequential loss of units. In the other (bottom), the side chain was lost, before ring opening at the amide bond between Ahp and Abu. For comparison, see ESIMS fragmentation pattern of lyngbyastatin 7, Figure S1. Note: All ions retained Na+.