Literature DB >> 20083649

A generation time effect on the rate of molecular evolution in invertebrates.

Jessica A Thomas1, John J Welch, Robert Lanfear, Lindell Bromham.   

Abstract

The rate of genome evolution varies significantly between species. Evidence is growing that at least some of this variation is associated with species characteristics, such as body size, diversification rate, or population size. One of the strongest correlates of the rate of molecular evolution in vertebrates is generation time (GT): Species with faster generation turnover tend to have higher rates of molecular evolution, presumably because their genomes are copied more frequently and therefore collect more DNA replication errors per unit time. But the GT effect has never been tested for nonvertebrate animals. Here, we present the first general test of the GT effect in invertebrates, using 15 genes from 143 species spread across the major eumetazoan superphyla (including arthropods, nematodes, molluscs, annelids, platyhelminthes, cnidarians, echinoderms, and urochordates). We find significant evidence that rates of molecular evolution are correlated with GT in invertebrates and that this effect applies consistently across genes and taxonomic groups. Furthermore, the GT effect is evident in nonsynonymous substitutions, whereas theory predicts (and most previous evidence has supported) a relationship only in synonymous changes. We discuss both the practical and theoretical implications of these findings.

Mesh:

Year:  2010        PMID: 20083649     DOI: 10.1093/molbev/msq009

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  66 in total

1.  Mutation rate is linked to diversification in birds.

Authors:  Robert Lanfear; Simon Y W Ho; Dominic Love; Lindell Bromham
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

2.  Support for the evolutionary speed hypothesis from intraspecific population genetic data in the non-biting midge Chironomus riparius.

Authors:  Ann-Marie Oppold; João A M Pedrosa; Miklós Bálint; João B Diogo; Julia Ilkova; João L T Pestana; Markus Pfenninger
Journal:  Proc Biol Sci       Date:  2016-02-24       Impact factor: 5.349

3.  Taller plants have lower rates of molecular evolution.

Authors:  Robert Lanfear; Simon Y W Ho; T Jonathan Davies; Angela T Moles; Lonnie Aarssen; Nathan G Swenson; Laura Warman; Amy E Zanne; Andrew P Allen
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

Review 4.  Alternative splicing and the evolution of phenotypic novelty.

Authors:  Stephen J Bush; Lu Chen; Jaime M Tovar-Corona; Araxi O Urrutia
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-02-05       Impact factor: 6.237

5.  Rates of change in climatic niches in plant and animal populations are much slower than projected climate change.

Authors:  Tereza Jezkova; John J Wiens
Journal:  Proc Biol Sci       Date:  2016-11-30       Impact factor: 5.349

6.  One Hundred Mitochondrial Genomes of Cicadas.

Authors:  Piotr Łukasik; Rebecca A Chong; Katherine Nazario; Yu Matsuura; De Anna C Bublitz; Matthew A Campbell; Mariah C Meyer; James T Van Leuven; Pablo Pessacq; Claudio Veloso; Chris Simon; John P McCutcheon
Journal:  J Hered       Date:  2019-03-05       Impact factor: 2.645

Review 7.  Molecular evolution and the latitudinal biodiversity gradient.

Authors:  E J Dowle; M Morgan-Richards; S A Trewick
Journal:  Heredity (Edinb)       Date:  2013-03-13       Impact factor: 3.821

8.  Genetic structure inferred from mitochondrial 12S ribosomal RNA sequence of Oncomelania quadrasi, the intermediate snail host of Schistosoma japonicum in the Philippines.

Authors:  Weerachai Saijuntha; Blanca Jarilla; Alvin K Leonardo; Louie S Sunico; Lydia R Leonardo; Ross H Andrews; Paiboon Sithithaworn; Trevor N Petney; Masashi Kirinoki; Naoko Kato-Hayashi; Mihoko Kikuchi; Yuichi Chigusa; Takeshi Agatsuma
Journal:  Am J Trop Med Hyg       Date:  2014-03-31       Impact factor: 2.345

9.  Scombroid fishes provide novel insights into the trait/rate associations of molecular evolution.

Authors:  Fan Qiu; Andrew Kitchen; J Gordon Burleigh; Michael M Miyamoto
Journal:  J Mol Evol       Date:  2014-05-09       Impact factor: 2.395

10.  The Dynamics, Causes, and Impacts of Mammalian Evolutionary Rates Revealed by the Analyses of Capybara Draft Genome Sequences.

Authors:  Isaac Adeyemi Babarinde; Naruya Saitou
Journal:  Genome Biol Evol       Date:  2020-08-01       Impact factor: 3.416

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