Literature DB >> 20080056

Molecular strategies for phosphorylation-mediated regulation of response regulator activity.

Rong Gao1, Ann M Stock.   

Abstract

Response regulator (RR) proteins exploit different molecular surfaces in their inactive and active conformations for a variety of regulatory intramolecular and/or intermolecular protein-protein interactions that either inhibit or activate effector domain activities. This versatile strategy enables numerous regulatory mechanisms among RRs. The recent accumulation of structures of inactive and active forms of multidomain RRs and RR complexes has revealed many different domain arrangements that have provided insight into regulatory mechanisms. Although diversity is the rule, even among subfamily members containing homologous domains, several structural modes of interaction and mechanisms of regulation recur frequently. These themes involve interactions at the alpha4-beta5-alpha5 face of the receiver domain, modes of dimerization of receiver domains, and inhibitory or activating heterodomain interactions. Copyright 2009 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20080056      PMCID: PMC2859964          DOI: 10.1016/j.mib.2009.12.009

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  48 in total

1.  Phosphorylation-induced dimerization of the FixJ receiver domain.

Authors:  S Da Re; J Schumacher; P Rousseau; J Fourment; C Ebel; D Kahn
Journal:  Mol Microbiol       Date:  1999-11       Impact factor: 3.501

2.  Conformational changes induced by phosphorylation of the FixJ receiver domain.

Authors:  C Birck; L Mourey; P Gouet; B Fabry; J Schumacher; P Rousseau; D Kahn; J P Samama
Journal:  Structure       Date:  1999-12-15       Impact factor: 5.006

3.  An active-like structure in the unphosphorylated StyR response regulator suggests a phosphorylation- dependent allosteric activation mechanism.

Authors:  Mario Milani; Livia Leoni; Giordano Rampioni; Elisabetta Zennaro; Paolo Ascenzi; Martino Bolognesi
Journal:  Structure       Date:  2005-09       Impact factor: 5.006

4.  Dimer form of phosphorylated Spo0A, a transcriptional regulator, stimulates the spo0F transcription at the initiation of sporulation in Bacillus subtilis.

Authors:  M Asayama; A Yamamoto; Y Kobayashi
Journal:  J Mol Biol       Date:  1995-06-30       Impact factor: 5.469

5.  Domain swapping in the sporulation response regulator Spo0A.

Authors:  R J Lewis; K Muchová; J A Brannigan; I Barák; G Leonard; A J Wilkinson
Journal:  J Mol Biol       Date:  2000-03-31       Impact factor: 5.469

6.  Crystal structure of an activated response regulator bound to its target.

Authors:  S Y Lee; H S Cho; J G Pelton; D Yan; R K Henderson; D S King; L Huang; S Kustu; E A Berry; D E Wemmer
Journal:  Nat Struct Biol       Date:  2001-01

Review 7.  Diversity of structure and function of response regulator output domains.

Authors:  Michael Y Galperin
Journal:  Curr Opin Microbiol       Date:  2010-03-11       Impact factor: 7.934

Review 8.  Structural and mechanistic determinants of c-di-GMP signalling.

Authors:  Tilman Schirmer; Urs Jenal
Journal:  Nat Rev Microbiol       Date:  2009-10       Impact factor: 60.633

9.  Activation of the diguanylate cyclase PleD by phosphorylation-mediated dimerization.

Authors:  Ralf Paul; Sören Abel; Paul Wassmann; Andreas Beck; Heiko Heerklotz; Urs Jenal
Journal:  J Biol Chem       Date:  2007-07-19       Impact factor: 5.157

10.  System-level mapping of Escherichia coli response regulator dimerization with FRET hybrids.

Authors:  Rong Gao; Yuan Tao; Ann M Stock
Journal:  Mol Microbiol       Date:  2008-07-09       Impact factor: 3.501

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  81 in total

1.  Phosphorylation of PhoP protein plays direct regulatory role in lipid biosynthesis of Mycobacterium tuberculosis.

Authors:  Rajni Goyal; Arijit Kumar Das; Ranjeet Singh; Pradip K Singh; Suresh Korpole; Dibyendu Sarkar
Journal:  J Biol Chem       Date:  2011-11-09       Impact factor: 5.157

2.  Determinants of interaction specificity of the Bacillus subtilis GlcT antitermination protein: functionality and phosphorylation specificity depend on the arrangement of the regulatory domains.

Authors:  Sebastian Himmel; Christopher P Zschiedrich; Stefan Becker; He-Hsuan Hsiao; Sebastian Wolff; Christine Diethmaier; Henning Urlaub; Donghan Lee; Christian Griesinger; Jörg Stülke
Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

3.  Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.

Authors:  Bruno Y Matsuyama; Petya V Krasteva; Claudine Baraquet; Caroline S Harwood; Holger Sondermann; Marcos V A S Navarro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

4.  Interaction of the RcsB Response Regulator with Auxiliary Transcription Regulators in Escherichia coli.

Authors:  Derk Pannen; Maria Fabisch; Lisa Gausling; Karin Schnetz
Journal:  J Biol Chem       Date:  2015-12-03       Impact factor: 5.157

Review 5.  Global regulation by the seven-component Pi signaling system.

Authors:  Yi-Ju Hsieh; Barry L Wanner
Journal:  Curr Opin Microbiol       Date:  2010-02-18       Impact factor: 7.934

6.  The atypical two-component sensor kinase Lpl0330 from Legionella pneumophila controls the bifunctional diguanylate cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic dimeric GMP synthesis.

Authors:  Mélanie Levet-Paulo; Jean-Claude Lazzaroni; Christophe Gilbert; Danièle Atlan; Patricia Doublet; Anne Vianney
Journal:  J Biol Chem       Date:  2011-07-13       Impact factor: 5.157

Review 7.  Sensing the messenger: the diverse ways that bacteria signal through c-di-GMP.

Authors:  Petya Violinova Krasteva; Krista Michelle Giglio; Holger Sondermann
Journal:  Protein Sci       Date:  2012-06-05       Impact factor: 6.725

8.  An asymmetric heterodomain interface stabilizes a response regulator-DNA complex.

Authors:  Anoop Narayanan; Shivesh Kumar; Amanda N Evrard; Lake N Paul; Dinesh A Yernool
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

9.  Phosphorylation-dependent derepression by the response regulator HnoC in the Shewanella oneidensis nitric oxide signaling network.

Authors:  Lars Plate; Michael A Marletta
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

10.  Identification of the amino acids essential for LytSR-mediated signal transduction in Staphylococcus aureus and their roles in biofilm-specific gene expression.

Authors:  McKenzie K Lehman; Jeffrey L Bose; Batu K Sharma-Kuinkel; Derek E Moormeier; Jennifer L Endres; Marat R Sadykov; Indranil Biswas; Kenneth W Bayles
Journal:  Mol Microbiol       Date:  2015-01-16       Impact factor: 3.501

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