Literature DB >> 20038096

13C ENDOR reveals that the D1 polypeptide C-terminus is directly bound to Mn in the photosystem II oxygen evolving complex.

Jamie A Stull1, Troy A Stich, Rachel J Service, Richard J Debus, Sanjay K Mandal, William H Armstrong, R David Britt.   

Abstract

Antiferromagnetically coupled Mn(III)Mn(IV) dimers have been commonly used to study biological systems that exhibit complex exchange interactions. Such is the case for the oxygen evolving complex (OEC) in photosystem II (PSII), where we have studied whether the C-terminal carboxylate of D1-Ala344 is directly bound to the Mn cluster. To probe these protein-derived carboxylate hyperfine interactions, which give direct bonding information, Q-band (34 GHz) Mims ENDOR was performed on a Mn(III)Mn(IV) dimer ([Mn(III)Mn(IV)(mu-O)(2)mu-OAc(TACN)(2)](BPh(4))(2)) (1) that was labeled with (13)C (I = (1)/(2)) at the carboxylate position of the acetate bridge. A(dip) is computed based on atomic coordinates from available X-ray crystal structures to be [-2.4, -0.8, 3.2] MHz. The value for A(iso) was determined based on simulation of the experimental ENDOR data, for complex 1 A(iso) = -1 MHz. Similar studies were then performed on PSII from Synechocystis sp. PCC 6803, in which all alanine-derived C=O groups are labeled with (13)C including the C-terminal alpha-COO(-) group of D1 (Ala344), as well as PSII proteins uniformly labeled with (13)C. Using recent X-ray crystallography data from T. elongatus the values for A(dip) were calculated and simulations of the experimental data led to A(iso) values of 1.2, 1, and 2 MHz, respectively. We infer from complex 1 that an A(iso) significantly larger than 1.2 MHz for a Mn-coordinating carboxylate moiety is unlikely. Therefore, we support the closer arrangement of Ala344 suggested by the Loll and Guskov structures and conclude that the C-terminal carboxylate of D1 polypeptide is directly bound to the Mn cluster.

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Year:  2010        PMID: 20038096      PMCID: PMC3418054          DOI: 10.1021/ja908688t

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

1.  Architecture of the photosynthetic oxygen-evolving center.

Authors:  Kristina N Ferreira; Tina M Iverson; Karim Maghlaoui; James Barber; So Iwata
Journal:  Science       Date:  2004-02-05       Impact factor: 47.728

2.  EasySpin, a comprehensive software package for spectral simulation and analysis in EPR.

Authors:  Stefan Stoll; Arthur Schweiger
Journal:  J Magn Reson       Date:  2005-09-26       Impact factor: 2.229

3.  Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II.

Authors:  Bernhard Loll; Jan Kern; Wolfram Saenger; Athina Zouni; Jacek Biesiadka
Journal:  Nature       Date:  2005-12-15       Impact factor: 49.962

4.  Biochemical and spectroscopic studies of the electronic structure and reactivity of a methyl-Ni species formed on methyl-coenzyme M reductase.

Authors:  Mishtu Dey; Joshua Telser; Ryan C Kunz; Nicholas S Lees; Stephen W Ragsdale; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2007-08-21       Impact factor: 15.419

5.  Protein Ligation of the Photosynthetic Oxygen-Evolving Center.

Authors:  Richard J Debus
Journal:  Coord Chem Rev       Date:  2008-02       Impact factor: 22.315

6.  Distance measurements between paramagnetic centers and a planar object by matrix Mims electron nuclear double resonance.

Authors:  Paul-Philipp Zänker; Gunnar Jeschke; Daniella Goldfarb
Journal:  J Chem Phys       Date:  2005-01-08       Impact factor: 3.488

7.  X-ray damage to the Mn4Ca complex in single crystals of photosystem II: a case study for metalloprotein crystallography.

Authors:  Junko Yano; Jan Kern; Klaus-Dieter Irrgang; Matthew J Latimer; Uwe Bergmann; Pieter Glatzel; Yulia Pushkar; Jacek Biesiadka; Bernhard Loll; Kenneth Sauer; Johannes Messinger; Athina Zouni; Vittal K Yachandra
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-15       Impact factor: 11.205

8.  Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride.

Authors:  Albert Guskov; Jan Kern; Azat Gabdulkhakov; Matthias Broser; Athina Zouni; Wolfram Saenger
Journal:  Nat Struct Mol Biol       Date:  2009-02-15       Impact factor: 15.369

9.  Multifrequency pulsed electron paramagnetic resonance study of the S2 state of the photosystem II manganese cluster.

Authors:  Gregory J Yeagle; M Lane Gilchrist; Robert M McCarrick; R David Britt
Journal:  Inorg Chem       Date:  2008-03-17       Impact factor: 5.165

10.  The Mn(2+)-bicarbonate complex in a frozen solution revisited by pulse W-band ENDOR.

Authors:  Alexey Potapov; Daniella Goldfarb
Journal:  Inorg Chem       Date:  2008-10-24       Impact factor: 5.165

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  8 in total

Review 1.  Metal ion oxidation state assignment based on coordinating ligand hyperfine interaction.

Authors:  Paul H Oyala; Troy A Stich; R David Britt
Journal:  Photosynth Res       Date:  2015-02-08       Impact factor: 3.573

2.  A genetically tagged Psb27 protein allows purification of two consecutive photosystem II (PSII) assembly intermediates in Synechocystis 6803, a cyanobacterium.

Authors:  Haijun Liu; Johnna L Roose; Jeffrey C Cameron; Himadri B Pakrasi
Journal:  J Biol Chem       Date:  2011-05-18       Impact factor: 5.157

3.  Evidence from FTIR difference spectroscopy of an extensive network of hydrogen bonds near the oxygen-evolving Mn(4)Ca cluster of photosystem II involving D1-Glu65, D2-Glu312, and D1-Glu329.

Authors:  Rachel J Service; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

4.  Ligation of D1-His332 and D1-Asp170 to the manganese cluster of photosystem II from Synechocystis assessed by multifrequency pulse EPR spectroscopy.

Authors:  Troy A Stich; Gregory J Yeagle; Rachel J Service; Richard J Debus; R David Britt
Journal:  Biochemistry       Date:  2011-08-08       Impact factor: 3.162

Review 5.  Use of electron paramagnetic resonance to solve biochemical problems.

Authors:  Indra D Sahu; Robert M McCarrick; Gary A Lorigan
Journal:  Biochemistry       Date:  2013-08-20       Impact factor: 3.162

6.  An Aminoimidazole Radical Intermediate in the Anaerobic Biosynthesis of the 5,6-Dimethylbenzimidazole Ligand to Vitamin B12.

Authors:  Derek M Gagnon; Troy A Stich; Angad P Mehta; Sameh H Abdelwahed; Tadhg P Begley; R David Britt
Journal:  J Am Chem Soc       Date:  2018-09-27       Impact factor: 15.419

Review 7.  Water oxidation in photosystem II.

Authors:  Wolfgang Lubitz; Maria Chrysina; Nicholas Cox
Journal:  Photosynth Res       Date:  2019-06-11       Impact factor: 3.573

Review 8.  Processing of D1 Protein: A Mysterious Process Carried Out in Thylakoid Lumen.

Authors:  Noritoshi Inagaki
Journal:  Int J Mol Sci       Date:  2022-02-25       Impact factor: 5.923

  8 in total

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