Literature DB >> 20029120

Development and exploration of a new methodology for the fitting and analysis of XAS data.

Mario Ulises Delgado-Jaime1, Pierre Kennepohl.   

Abstract

A new data analysis methodology for X-ray absorption near-edge spectroscopy (XANES) is introduced and tested using several examples. The methodology has been implemented within the context of a new Matlab-based program discussed in a companion related article [Delgado-Jaime et al. (2010), J. Synchrotron Rad. 17, 132-137]. The approach makes use of a Monte Carlo search method to seek appropriate starting points for a fit model, allowing for the generation of a large number of independent fits with minimal user-induced bias. The applicability of this methodology is tested using various data sets on the Cl K-edge XAS data for tetragonal CuCl(4)(2-), a common reference compound used for calibration and covalency estimation in M-Cl bonds. A new background model function that effectively blends together background profiles with spectral features is an important component of the discussed methodology. The development of a robust evaluation function to fit multiple-edge data is discussed and the implications regarding standard approaches to data analysis are discussed and explored within these examples.

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Year:  2009        PMID: 20029120      PMCID: PMC2816928          DOI: 10.1107/S090904950904655X

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  9 in total

1.  About estimation of fitted parameters' statistical uncertainties in EXAFS. Critical approach on usual and Monte Carlo methods.

Authors:  Emmanuel Curis; Simone Bénazeth
Journal:  J Synchrotron Radiat       Date:  2005-04-14       Impact factor: 2.616

2.  A method for normalization of X-ray absorption spectra.

Authors:  Tsu-Chien Weng; Geoffrey S Waldo; James E Penner-Hahn
Journal:  J Synchrotron Radiat       Date:  2005-06-15       Impact factor: 2.616

3.  Propagation of statistical errors across EXAFS extraction and Fourier filtering.

Authors:  E Curis; S Bénazeth
Journal:  J Synchrotron Radiat       Date:  2000-07-01       Impact factor: 2.616

4.  Blueprint XAS: a Matlab-based toolbox for the fitting and analysis of XAS spectra.

Authors:  Mario Ulises Delgado-Jaime; Craig Philip Mewis; Pierre Kennepohl
Journal:  J Synchrotron Radiat       Date:  2009-12-09       Impact factor: 2.616

5.  Ligand K-edge X-ray absorption spectroscopy: a direct probe of ligand-metal covalency.

Authors:  T Glaser; B Hedman; K O Hodgson; E I Solomon
Journal:  Acc Chem Res       Date:  2000-12       Impact factor: 22.384

6.  X-ray absorption spectroscopy as a probe of microbial sulfur biochemistry: the nature of bacterial sulfur globules revisited.

Authors:  Graham N George; Manuel Gnida; Dennis A Bazylinski; Roger C Prince; Ingrid J Pickering
Journal:  J Bacteriol       Date:  2008-08-01       Impact factor: 3.490

7.  Electronic structural investigations of ruthenium compounds and anticancer prodrugs.

Authors:  Travis V Harris; Robert K Szilagyi; Karen L McFarlane Holman
Journal:  J Biol Inorg Chem       Date:  2009-04-07       Impact factor: 3.358

8.  Influence of oxygenation on the reactivity of ruthenium-thiolato bonds in arene anticancer complexes: insights from XAS and DFT.

Authors:  Thamayanthy Sriskandakumar; Holm Petzold; Pieter C A Bruijnincx; Abraha Habtemariam; Peter J Sadler; Pierre Kennepohl
Journal:  J Am Chem Soc       Date:  2009-09-23       Impact factor: 15.419

9.  An electronic rationale for observed initiation rates in ruthenium-mediated olefin metathesis: charge donation in phosphine and N-heterocyclic carbene ligands.

Authors:  Kendra Getty; Mario Ulises Delgado-Jaime; Pierre Kennepohl
Journal:  J Am Chem Soc       Date:  2007-11-30       Impact factor: 15.419

  9 in total
  8 in total

1.  Identification of a single light atom within a multinuclear metal cluster using valence-to-core X-ray emission spectroscopy.

Authors:  Mario Ulises Delgado-Jaime; Benjamin R Dible; Karen P Chiang; William W Brennessel; Uwe Bergmann; Patrick L Holland; Serena DeBeer
Journal:  Inorg Chem       Date:  2011-09-28       Impact factor: 5.165

2.  Bis(imino)pyridine Iron Dinitrogen Compounds Revisited: Differences in Electronic Structure Between Four- and Five-Coordinate Derivatives.

Authors:  S Chantal E Stieber; Carsten Milsmann; Jordan M Hoyt; Zoë R Turner; Kenneth D Finkelstein; Karl Wieghardt; Serena Debeer; Paul J Chirik
Journal:  Organometallics       Date:  2012-03-12       Impact factor: 3.876

3.  Evidence for halogen bond covalency in acyclic and interlocked halogen-bonding receptor anion recognition.

Authors:  Sean W Robinson; Chantal L Mustoe; Nicholas G White; Asha Brown; Amber L Thompson; Pierre Kennepohl; Paul D Beer
Journal:  J Am Chem Soc       Date:  2014-12-22       Impact factor: 15.419

4.  In-Situ 2p3d Resonant Inelastic X-ray Scattering Tracking Cobalt Nanoparticle Reduction.

Authors:  Boyang Liu; Matti M van Schooneveld; Yi-Tao Cui; Jun Miyawaki; Yoshihisa Harada; Thomas O Eschemann; Krijn P de Jong; Mario U Delgado-Jaime; Frank M F de Groot
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2017-07-14       Impact factor: 4.126

5.  Spectroscopic detection of halogen bonding resolves dye regeneration in the dye-sensitized solar cell.

Authors:  Fraser G L Parlane; Chantal Mustoe; Cameron W Kellett; Sarah J Simon; Wesley B Swords; Gerald J Meyer; Pierre Kennepohl; Curtis P Berlinguette
Journal:  Nat Commun       Date:  2017-11-24       Impact factor: 14.919

6.  The Multifaceted Role of Methylaluminoxane in Metallocene-Based Olefin Polymerization Catalysis.

Authors:  Marjolein E Z Velthoen; Ara Muñoz-Murillo; Abdelkbir Bouhmadi; Michaël Cecius; Steve Diefenbach; Bert M Weckhuysen
Journal:  Macromolecules       Date:  2018-01-02       Impact factor: 5.985

7.  Nature of cobalt species during the in situ sulfurization of Co(Ni)Mo/Al2O3 hydrodesulfurization catalysts.

Authors:  Mustafa Al Samarai; Christa H M van Oversteeg; Mario Ulises Delgado-Jaime; Tsu Chien Weng; Dimosthenis Sokaras; Boyang Liu; Marte van der Linden; Ad M J van der Eerden; Eelco T C Vogt; Bert M Weckhuysen; Frank M F de Groot
Journal:  J Synchrotron Radiat       Date:  2019-04-26       Impact factor: 2.616

8.  Molybdenum L-Edge XAS Spectra of MoFe Nitrogenase.

Authors:  Ragnar Bjornsson; Mario U Delgado-Jaime; Frederico A Lima; Daniel Sippel; Julia Schlesier; Thomas Weyhermüller; Oliver Einsle; Frank Neese; Serena DeBeer
Journal:  Z Anorg Allg Chem       Date:  2014-11-27       Impact factor: 1.492

  8 in total

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