Literature DB >> 18676668

X-ray absorption spectroscopy as a probe of microbial sulfur biochemistry: the nature of bacterial sulfur globules revisited.

Graham N George1, Manuel Gnida, Dennis A Bazylinski, Roger C Prince, Ingrid J Pickering.   

Abstract

The chemical nature of the sulfur in bacterial sulfur globules has been the subject of controversy for a number of years. Sulfur K-edge X-ray absorption spectroscopy (XAS) is a powerful technique for probing the chemical forms of sulfur in situ, but two groups have used it with very different conclusions. The root of the controversy lies with the different detection strategies used by the two groups, which result in very different spectra. This paper seeks to resolve the controversy. We experimentally demonstrate that the use of transmittance detection for sulfur K-edge XAS measurements is highly prone to spectroscopic distortions and that much of the published work on sulfur bacteria is very likely based on distorted data. We also demonstrate that all three detection methods used for X-ray absorption experiments yield essentially identical spectra when the measurements are carried out under conditions where no experimental distortions are expected. Finally, we turn to the original question--the chemical nature of bacterial sulfur. We examine isolated sulfur globules of Allochromatium vinosum and intact cells of a strain of magnetotactic coccus and show that XAS indicates the presence of a chemical form of sulfur resembling S(8).

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Year:  2008        PMID: 18676668      PMCID: PMC2566007          DOI: 10.1128/JB.00539-08

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  27 in total

1.  In situ analysis of sulfur in the sulfur globules of phototrophic sulfur bacteria by X-ray absorption near edge spectroscopy.

Authors:  A Prange; I Arzberger; C Engemann; H Modrow; O Schumann; H G Trüper; R Steudel; C Dahl; J Hormes
Journal:  Biochim Biophys Acta       Date:  1999-08-05

Review 2.  Sulfur oxidation by phototrophic bacteria.

Authors:  D C Brune
Journal:  Biochim Biophys Acta       Date:  1989-07-13

3.  XAS-Collect: a computer program for X-ray absorption spectroscopic data acquisition.

Authors:  M J George
Journal:  J Synchrotron Radiat       Date:  2000-07-01       Impact factor: 2.616

4.  Utilization of solid "elemental" sulfur by the phototrophic purple sulfur bacterium Allochromatium vinosum: a sulfur K-edge X-ray absorption spectroscopy study.

Authors:  Bettina Franz; Henning Lichtenberg; Josef Hormes; Hartwig Modrow; Christiane Dahl; Alexander Prange
Journal:  Microbiology       Date:  2007-04       Impact factor: 2.777

5.  Speciation of sulfur from filamentous microbial mats from sulfidic cave springs using X-ray absorption near-edge spectroscopy.

Authors:  Annette Summers Engel; Henning Lichtenberg; Alexander Prange; Josef Hormes
Journal:  FEMS Microbiol Lett       Date:  2007-01-15       Impact factor: 2.742

6.  In situ analysis of sulfur species in sulfur globules produced from thiosulfate by Thermoanaerobacter sulfurigignens and Thermoanaerobacterium thermosulfurigenes.

Authors:  Yong-Jin Lee; Alexander Prange; Henning Lichtenberg; Manfred Rohde; Mona Dashti; Juergen Wiegel
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

7.  Crystal structure studies on sulfur oxygenase reductase from Acidianus tengchongensis.

Authors:  Mei Li; Zhiwei Chen; Pingfeng Zhang; Xiaowei Pan; Chengying Jiang; Xiaomin An; Shuangjiang Liu; Wenrui Chang
Journal:  Biochem Biophys Res Commun       Date:  2008-03-07       Impact factor: 3.575

8.  Microbial desulfurization of a crude oil middle-distillate fraction: analysis of the extent of sulfur removal and the effect of removal on remaining sulfur.

Authors:  M J Grossman; M K Lee; R C Prince; K K Garrett; G N George; I J Pickering
Journal:  Appl Environ Microbiol       Date:  1999-01       Impact factor: 4.792

9.  Evidence for autotrophy via the reverse tricarboxylic acid cycle in the marine magnetotactic coccus strain MC-1.

Authors:  Timothy J Williams; Chuanlun L Zhang; James H Scott; Dennis A Bazylinski
Journal:  Appl Environ Microbiol       Date:  2006-02       Impact factor: 4.792

10.  Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function.

Authors:  Michael Richter; Michael Kube; Dennis A Bazylinski; Thierry Lombardot; Frank Oliver Glöckner; Richard Reinhardt; Dirk Schüler
Journal:  J Bacteriol       Date:  2007-04-20       Impact factor: 3.490

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  16 in total

1.  Magnetotactic bacteria in microcosms originating from the French Mediterranean Coast subjected to oil industry activities.

Authors:  Anne Postec; Nicolas Tapia; Alain Bernadac; Manon Joseph; Sylvain Davidson; Long-Fei Wu; Bernard Ollivier; Nathalie Pradel
Journal:  Microb Ecol       Date:  2011-07-16       Impact factor: 4.552

2.  Development and exploration of a new methodology for the fitting and analysis of XAS data.

Authors:  Mario Ulises Delgado-Jaime; Pierre Kennepohl
Journal:  J Synchrotron Radiat       Date:  2009-12-09       Impact factor: 2.616

3.  Using solution- and solid-state S K-edge X-ray absorption spectroscopy with density functional theory to evaluate M-S bonding for MS4(2-) (M = Cr, Mo, W) dianions.

Authors:  Angela C Olson; Jason M Keith; Enrique R Batista; Kevin S Boland; Scott R Daly; Stosh A Kozimor; Molly M MacInnes; Richard L Martin; Brian L Scott
Journal:  Dalton Trans       Date:  2014-12-14       Impact factor: 4.390

4.  Rhodanese functions as sulfur supplier for key enzymes in sulfur energy metabolism.

Authors:  Clément Aussignargues; Marie-Cécile Giuliani; Pascale Infossi; Elisabeth Lojou; Marianne Guiral; Marie-Thérèse Giudici-Orticoni; Marianne Ilbert
Journal:  J Biol Chem       Date:  2012-04-10       Impact factor: 5.157

5.  Polysulfides as intermediates in the oxidation of sulfide to sulfate by Beggiatoa spp.

Authors:  Jasmine S Berg; Anne Schwedt; Anne-Christin Kreutzmann; Marcel M M Kuypers; Jana Milucka
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

6.  Investigation of elemental sulfur speciation transformation mediated by Acidithiobacillus ferrooxidans.

Authors:  Huan He; Cheng-Gui Zhang; Jin-Lan Xia; An-An Peng; Yi Yang; Hong-Chen Jiang; Lei Zheng; Chen-Yan Ma; Yi-Dong Zhao; Zhen-Yuan Nie; Guan-Zhou Qiu
Journal:  Curr Microbiol       Date:  2008-12-16       Impact factor: 2.188

7.  Mechanisms of extracellular S0 globule production and degradation in Chlorobaculumtepidum via dynamic cell-globule interactions.

Authors:  C L Marnocha; A T Levy; D H Powell; T E Hanson; C S Chan
Journal:  Microbiology       Date:  2016-04-26       Impact factor: 2.777

8.  The chemical forms of mercury in aged and fresh dental amalgam surfaces.

Authors:  Graham N George; Satya P Singh; Jay Hoover; Ingrid J Pickering
Journal:  Chem Res Toxicol       Date:  2009-11       Impact factor: 3.739

9.  Growth of Acidithiobacillus Ferrooxidans ATCC 23270 in Thiosulfate Under Oxygen-Limiting Conditions Generates Extracellular Sulfur Globules by Means of a Secreted Tetrathionate Hydrolase.

Authors:  Simón Beard; Alberto Paradela; Juan P Albar; Carlos A Jerez
Journal:  Front Microbiol       Date:  2011-04-18       Impact factor: 5.640

10.  Long-range chemical sensitivity in the sulfur K-edge X-ray absorption spectra of substituted thiophenes.

Authors:  Graham N George; Mark J Hackett; Michael Sansone; Martin L Gorbaty; Simon R Kelemen; Roger C Prince; Hugh H Harris; Ingrid J Pickering
Journal:  J Phys Chem A       Date:  2014-08-26       Impact factor: 2.781

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