Literature DB >> 20016667

Improving the performance of predictive process modeling for large datasets.

Andrew O Finley1, Huiyan Sang, Sudipto Banerjee, Alan E Gelfand.   

Abstract

Advances in Geographical Information Systems (GIS) and Global Positioning Systems (GPS) enable accurate geocoding of locations where scientific data are collected. This has encouraged collection of large spatial datasets in many fields and has generated considerable interest in statistical modeling for location-referenced spatial data. The setting where the number of locations yielding observations is too large to fit the desired hierarchical spatial random effects models using Markov chain Monte Carlo methods is considered. This problem is exacerbated in spatial-temporal and multivariate settings where many observations occur at each location. The recently proposed predictive process, motivated by kriging ideas, aims to maintain the richness of desired hierarchical spatial modeling specifications in the presence of large datasets. A shortcoming of the original formulation of the predictive process is that it induces a positive bias in the non-spatial error term of the models. A modified predictive process is proposed to address this problem. The predictive process approach is knot-based leading to questions regarding knot design. An algorithm is designed to achieve approximately optimal spatial placement of knots. Detailed illustrations of the modified predictive process using multivariate spatial regression with both a simulated and a real dataset are offered.

Entities:  

Year:  2009        PMID: 20016667      PMCID: PMC2743161          DOI: 10.1016/j.csda.2008.09.008

Source DB:  PubMed          Journal:  Comput Stat Data Anal        ISSN: 0167-9473            Impact factor:   1.681


  2 in total

1.  Gaussian predictive process models for large spatial data sets.

Authors:  Sudipto Banerjee; Alan E Gelfand; Andrew O Finley; Huiyan Sang
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2008-09-01       Impact factor: 4.488

2.  Hierarchical spatial modeling of additive and dominance genetic variance for large spatial trial datasets.

Authors:  Andrew O Finley; Sudipto Banerjee; Patrik Waldmann; Tore Ericsson
Journal:  Biometrics       Date:  2009-06       Impact factor: 2.571

  2 in total
  21 in total

1.  Adaptive Gaussian Predictive Process Models for Large Spatial Datasets.

Authors:  Rajarshi Guhaniyogi; Andrew O Finley; Sudipto Banerjee; Alan E Gelfand
Journal:  Environmetrics       Date:  2011-12       Impact factor: 1.900

2.  Bayesian Modeling for Large Spatial Datasets.

Authors:  Sudipto Banerjee; Montserrat Fuentes
Journal:  Wiley Interdiscip Rev Comput Stat       Date:  2012-01

3.  Applying spatiotemporal models to monitoring data to quantify fish population responses to the Deepwater Horizon oil spill in the Gulf of Mexico.

Authors:  Eric J Ward; Kiva L Oken; Kenneth A Rose; Shaye Sable; Katherine Watkins; Elizabeth E Holmes; Mark D Scheuerell
Journal:  Environ Monit Assess       Date:  2018-08-18       Impact factor: 2.513

4.  Hierarchical Spatial Process Models for Multiple Traits in Large Genetic Trials.

Authors:  Sudipto Banerjee; Andrew O Finley; Patrik Waldmann; Tore Ericsson
Journal:  J Am Stat Assoc       Date:  2010-06-01       Impact factor: 5.033

5.  Kernel Averaged Predictors for Spatio-Temporal Regression Models.

Authors:  Matthew J Heaton; Alan E Gelfand
Journal:  Spat Stat       Date:  2012-12-01

6.  Hierarchical Modeling for Spatial Data Problems.

Authors:  Alan E Gelfand
Journal:  Spat Stat       Date:  2012-05-01

7.  Bayesian Modeling and Analysis of Geostatistical Data.

Authors:  Alan E Gelfand; Sudipto Banerjee
Journal:  Annu Rev Stat Appl       Date:  2016-11-28       Impact factor: 5.810

8.  High-Dimensional Bayesian Geostatistics.

Authors:  Sudipto Banerjee
Journal:  Bayesian Anal       Date:  2017-05-16       Impact factor: 3.728

9.  Efficient algorithms for Bayesian Nearest Neighbor Gaussian Processes.

Authors:  Andrew O Finley; Abhirup Datta; Bruce C Cook; Douglas C Morton; Hans E Andersen; Sudipto Banerjee
Journal:  J Comput Graph Stat       Date:  2019-04-01       Impact factor: 2.302

10.  Hierarchical factor models for large spatially misaligned data: a low-rank predictive process approach.

Authors:  Qian Ren; Sudipto Banerjee
Journal:  Biometrics       Date:  2013-02-04       Impact factor: 2.571

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