Literature DB >> 20009197

Implementation and evaluation of various demons deformable image registration algorithms on a GPU.

Xuejun Gu1, Hubert Pan, Yun Liang, Richard Castillo, Deshan Yang, Dongju Choi, Edward Castillo, Amitava Majumdar, Thomas Guerrero, Steve B Jiang.   

Abstract

Online adaptive radiation therapy (ART) promises the ability to deliver an optimal treatment in response to daily patient anatomic variation. A major technical barrier for the clinical implementation of online ART is the requirement of rapid image segmentation. Deformable image registration (DIR) has been used as an automated segmentation method to transfer tumor/organ contours from the planning image to daily images. However, the current computational time of DIR is insufficient for online ART. In this work, this issue is addressed by using computer graphics processing units (GPUs). A gray-scale-based DIR algorithm called demons and five of its variants were implemented on GPUs using the compute unified device architecture (CUDA) programming environment. The spatial accuracy of these algorithms was evaluated over five sets of pulmonary 4D CT images with an average size of 256 x 256 x 100 and more than 1100 expert-determined landmark point pairs each. For all the testing scenarios presented in this paper, the GPU-based DIR computation required around 7 to 11 s to yield an average 3D error ranging from 1.5 to 1.8 mm. It is interesting to find out that the original passive force demons algorithms outperform subsequently proposed variants based on the combination of accuracy, efficiency and ease of implementation.

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Year:  2010        PMID: 20009197     DOI: 10.1088/0031-9155/55/1/012

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  71 in total

1.  A method to evaluate dose errors introduced by dose mapping processes for mass conserving deformations.

Authors:  C Yan; G Hugo; F J Salguero; N Saleh-Sayah; E Weiss; W C Sleeman; J V Siebers
Journal:  Med Phys       Date:  2012-04       Impact factor: 4.071

2.  A GPU implementation of a track-repeating algorithm for proton radiotherapy dose calculations.

Authors:  Pablo P Yepes; Dragan Mirkovic; Phillip J Taddei
Journal:  Phys Med Biol       Date:  2010-11-12       Impact factor: 3.609

3.  3D fluoroscopic image estimation using patient-specific 4DCBCT-based motion models.

Authors:  S Dhou; M Hurwitz; P Mishra; W Cai; J Rottmann; R Li; C Williams; M Wagar; R Berbeco; D Ionascu; J H Lewis
Journal:  Phys Med Biol       Date:  2015-04-23       Impact factor: 3.609

4.  Estimation of three-dimensional intrinsic dosimetric uncertainties resulting from using deformable image registration for dose mapping.

Authors:  Francisco J Salguero; Nahla K Saleh-Sayah; Chenyu Yan; Jeffrey V Siebers
Journal:  Med Phys       Date:  2011-01       Impact factor: 4.071

5.  Joint CT/CBCT deformable registration and CBCT enhancement for cancer radiotherapy.

Authors:  Yifei Lou; Tianye Niu; Xun Jia; Patricio A Vela; Lei Zhu; Allen R Tannenbaum
Journal:  Med Image Anal       Date:  2013-02-04       Impact factor: 8.545

6.  A hybrid reconstruction algorithm for fast and accurate 4D cone-beam CT imaging.

Authors:  Hao Yan; Xin Zhen; Michael Folkerts; Yongbao Li; Tinsu Pan; Laura Cervino; Steve B Jiang; Xun Jia
Journal:  Med Phys       Date:  2014-07       Impact factor: 4.071

7.  Patient-specific quantification of respiratory motion-induced dose uncertainty for step-and-shoot IMRT of lung cancer.

Authors:  Heng Li; Peter Park; Wei Liu; Jason Matney; Zhongxing Liao; Peter Balter; Yupeng Li; Xiaodong Zhang; Xiaoqiang Li; X Ronald Zhu
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

8.  CT to cone-beam CT deformable registration with simultaneous intensity correction.

Authors:  Xin Zhen; Xuejun Gu; Hao Yan; Linghong Zhou; Xun Jia; Steve B Jiang
Journal:  Phys Med Biol       Date:  2012-10-03       Impact factor: 3.609

9.  Automatic deformable surface registration for medical applications by radial basis function-based robust point-matching.

Authors:  Youngjun Kim; Yong Hum Na; Lei Xing; Rena Lee; Sehyung Park
Journal:  Comput Biol Med       Date:  2016-08-11       Impact factor: 4.589

10.  dPIRPLE: a joint estimation framework for deformable registration and penalized-likelihood CT image reconstruction using prior images.

Authors:  H Dang; A S Wang; Marc S Sussman; J H Siewerdsen; J W Stayman
Journal:  Phys Med Biol       Date:  2014-08-06       Impact factor: 3.609

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