Literature DB >> 20005247

Crystal growth of proteins, nucleic acids, and viruses in gels.

Bernard Lorber1, Claude Sauter, Anne Théobald-Dietrich, Abel Moreno, Pascale Schellenberger, Marie-Claire Robert, Bernard Capelle, Sarah Sanglier, Noëlle Potier, Richard Giegé.   

Abstract

Medium-sized single crystals with perfect habits and no defect producing intense and well-resolved diffraction patterns are the dream of every protein crystallographer. Crystals of biological macromolecules possessing these characteristics can be prepared within a medium in which mass transport is restricted to diffusion. Chemical gels (like polysiloxane) and physical gels (such as agarose) provide such an environment and are therefore suitable for the crystallisation of biological macromolecules. Instructions for the preparation of each type of gel are given to urge crystal growers to apply diffusive media for enhancing crystallographic quality of their crystals. Examples of quality enhancement achieved with silica and agarose gels are given. Results obtained with other substances forming gel-like media (such as lipidic phases and cellulose derivatives) are presented. Finally, the use of gels in combination with capillary tubes for counter-diffusion experiments is discussed. Methods and techniques implemented with proteins can also be applied to nucleic acids and nucleoprotein assemblies such as viruses.

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Year:  2009        PMID: 20005247     DOI: 10.1016/j.pbiomolbio.2009.12.002

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  15 in total

1.  Biocrystallography: past, present, future.

Authors:  Richard Giegé; Claude Sauter
Journal:  HFSP J       Date:  2010-04-22

Review 2.  The role of mass transport in protein crystallization.

Authors:  Juan Manuel García-Ruiz; Fermín Otálora; Alfonso García-Caballero
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-01-26       Impact factor: 1.056

3.  Improving RNA Crystal Diffraction Quality by Postcrystallization Treatment.

Authors:  Jinwei Zhang; Adrian R Ferré-D'Amaré
Journal:  Methods Mol Biol       Date:  2021

4.  Dramatic improvement of crystals of large RNAs by cation replacement and dehydration.

Authors:  Jinwei Zhang; Adrian R Ferré-D'Amaré
Journal:  Structure       Date:  2014-09-02       Impact factor: 5.006

5.  Post-crystallization Improvement of RNA Crystal Diffraction Quality.

Authors:  Jinwei Zhang; Adrian R Ferré-D'Amaré
Journal:  Methods Mol Biol       Date:  2015

6.  Protein crystallization for X-ray crystallography.

Authors:  Moshe A Dessau; Yorgo Modis
Journal:  J Vis Exp       Date:  2011-01-16       Impact factor: 1.355

7.  A novel inert crystal delivery medium for serial femtosecond crystallography.

Authors:  Chelsie E Conrad; Shibom Basu; Daniel James; Dingjie Wang; Alexander Schaffer; Shatabdi Roy-Chowdhury; Nadia A Zatsepin; Andrew Aquila; Jesse Coe; Cornelius Gati; Mark S Hunter; Jason E Koglin; Christopher Kupitz; Garrett Nelson; Ganesh Subramanian; Thomas A White; Yun Zhao; James Zook; Sébastien Boutet; Vadim Cherezov; John C H Spence; Raimund Fromme; Uwe Weierstall; Petra Fromme
Journal:  IUCrJ       Date:  2015-06-30       Impact factor: 4.769

8.  Purification, characterization and crystallization of the human 80S ribosome.

Authors:  Heena Khatter; Alexander G Myasnikov; Leslie Mastio; Isabelle M L Billas; Catherine Birck; Stefano Stella; Bruno P Klaholz
Journal:  Nucleic Acids Res       Date:  2014-01-21       Impact factor: 16.971

9.  Post-crystallization Improvement of RNA Crystals by Synergistic Ion Exchange and Dehydration.

Authors:  Jinwei Zhang; Adrian R Ferré-D'Amaré
Journal:  Bio Protoc       Date:  2015-09-20

Review 10.  An overview of biological macromolecule crystallization.

Authors:  Irene Russo Krauss; Antonello Merlino; Alessandro Vergara; Filomena Sica
Journal:  Int J Mol Sci       Date:  2013-05-31       Impact factor: 5.923

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