Literature DB >> 20004590

The origins of the Rag genes--from transposition to V(D)J recombination.

Sebastian D Fugmann1.   

Abstract

The recombination activating genes 1 and 2 (Rag1 and Rag2) encode the key enzyme that is required for the generation of the highly diversified antigen receptor repertoire central to adaptive immunity. The longstanding model proposed that this gene pair was acquired by horizontal gene transfer to explain its abrupt appearance in the vertebrate lineage. The analyses of the enormous amount of sequence data created by many genome sequencing projects now provide the basis for a more refined model as to how this unique gene pair evolved from a selfish DNA transposon into a sophisticated DNA recombinase essential for immunity. (c) 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 20004590      PMCID: PMC2823946          DOI: 10.1016/j.smim.2009.11.004

Source DB:  PubMed          Journal:  Semin Immunol        ISSN: 1044-5323            Impact factor:   11.130


  52 in total

Review 1.  The RAG proteins and V(D)J recombination: complexes, ends, and transposition.

Authors:  S D Fugmann; A I Lee; P E Shockett; I J Villey; D G Schatz
Journal:  Annu Rev Immunol       Date:  2000       Impact factor: 28.527

2.  Identification of two catalytic residues in RAG1 that define a single active site within the RAG1/RAG2 protein complex.

Authors:  S D Fugmann; I J Villey; L M Ptaszek; D G Schatz
Journal:  Mol Cell       Date:  2000-01       Impact factor: 17.970

3.  Identification of basic residues in RAG2 critical for DNA binding by the RAG1-RAG2 complex.

Authors:  S D Fugmann; D G Schatz
Journal:  Mol Cell       Date:  2001-10       Impact factor: 17.970

4.  Identification of two topologically independent domains in RAG1 and their role in macromolecular interactions relevant to V(D)J recombination.

Authors:  J L Arbuckle; L A Fauss; R Simpson; L M Ptaszek; K K Rodgers
Journal:  J Biol Chem       Date:  2001-07-30       Impact factor: 5.157

Review 5.  The lore of the RINGs: substrate recognition and catalysis by ubiquitin ligases.

Authors:  P K Jackson; A G Eldridge; E Freed; L Furstenthal; J Y Hsu; B K Kaiser; J D Reimann
Journal:  Trends Cell Biol       Date:  2000-10       Impact factor: 20.808

6.  Cyclin A/CDK2 regulates V(D)J recombination by coordinating RAG-2 accumulation and DNA repair.

Authors:  J Lee; S Desiderio
Journal:  Immunity       Date:  1999-12       Impact factor: 31.745

7.  In vivo transposition mediated by V(D)J recombinase in human T lymphocytes.

Authors:  Terri L Messier; J Patrick O'Neill; Sai-Mei Hou; Janice A Nicklas; Barry A Finette
Journal:  EMBO J       Date:  2003-03-17       Impact factor: 11.598

8.  Three-dimensional structure of the Tn5 synaptic complex transposition intermediate.

Authors:  D R Davies; I Y Goryshin; W S Reznikoff; I Rayment
Journal:  Science       Date:  2000-07-07       Impact factor: 47.728

9.  The central domain of core RAG1 preferentially recognizes single-stranded recombination signal sequence heptamer.

Authors:  Mandy M Peak; Janeen L Arbuckle; Karla K Rodgers
Journal:  J Biol Chem       Date:  2003-03-18       Impact factor: 5.157

10.  Molecular paleontology of transposable elements in the Drosophila melanogaster genome.

Authors:  Vladimir V Kapitonov; Jerzy Jurka
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-12       Impact factor: 11.205

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  36 in total

1.  Antibody repertoire development in fetal and neonatal piglets. XXII. λ Rearrangement precedes κ rearrangement during B-cell lymphogenesis in swine.

Authors:  Xiuzhu Sun; Nancy Wertz; Kelly Lager; Marek Sinkora; Katerina Stepanova; Gregory Tobin; John E Butler
Journal:  Immunology       Date:  2012-10       Impact factor: 7.397

2.  Grand challenge commentary: The chemistry of a dynamic genome.

Authors:  Rahul M Kohli
Journal:  Nat Chem Biol       Date:  2010-12       Impact factor: 15.040

Review 3.  Immune-Microbiota Interactions: Dysbiosis as a Global Health Issue.

Authors:  Alan C Logan; Felice N Jacka; Susan L Prescott
Journal:  Curr Allergy Asthma Rep       Date:  2016-02       Impact factor: 4.806

4.  Mapping and Quantitation of the Interaction between the Recombination Activating Gene Proteins RAG1 and RAG2.

Authors:  Yu-Hang Zhang; Keerthi Shetty; Marius D Surleac; Andrei J Petrescu; David G Schatz
Journal:  J Biol Chem       Date:  2015-03-05       Impact factor: 5.157

5.  The RAG transposon is active through the deuterostome evolution and domesticated in jawed vertebrates.

Authors:  Jose Ricardo Morales Poole; Sheng Feng Huang; Anlong Xu; Justine Bayet; Pierre Pontarotti
Journal:  Immunogenetics       Date:  2017-04-28       Impact factor: 2.846

Review 6.  Epigenetic aspects of lymphocyte antigen receptor gene rearrangement or 'when stochasticity completes randomness'.

Authors:  Sébastien Jaeger; Bastien Fernandez; Pierre Ferrier
Journal:  Immunology       Date:  2013-06       Impact factor: 7.397

Review 7.  Diversity and evolution of transposable elements in Arabidopsis.

Authors:  Zoé Joly-Lopez; Thomas E Bureau
Journal:  Chromosome Res       Date:  2014-06       Impact factor: 5.239

8.  Structural basis for the activation and suppression of transposition during evolution of the RAG recombinase.

Authors:  Yuhang Zhang; Elizabeth Corbett; Shenping Wu; David G Schatz
Journal:  EMBO J       Date:  2020-09-18       Impact factor: 11.598

Review 9.  Evolution of adaptive immunity from transposable elements combined with innate immune systems.

Authors:  Eugene V Koonin; Mart Krupovic
Journal:  Nat Rev Genet       Date:  2014-12-09       Impact factor: 53.242

10.  Reproductive immunology in viviparous mammals: evolutionary paradox of interactions among immune mechanisms and autologous or allogeneic gametes and semiallogeneic foetuses.

Authors:  M Samardžija; M Lojkić; N Maćešić; H Valpotić; I Butković; J Šavorić; I Žura Žaja; D Leiner; D Đuričić; F Marković; P Kočila; Z Vidas; M Gerenčer; A Kaštelan; A Milovanović; M Lazarević; D Rukavina; I Valpotić
Journal:  Vet Q       Date:  2020-12       Impact factor: 3.320

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