Literature DB >> 20004028

Recent advances and method development for drug target identification.

Janet N Y Chan1, Corey Nislow, Andrew Emili.   

Abstract

Although it is commonly recognized that most drugs cause inhibition or activation of function by physically binding to one or more gene products, the direct interactions of bioactive small molecules with specific gene products, or targets, is often not well characterized. From a therapeutic perspective, it is nevertheless essential to know a drug's binding partner(s) to understand the mechanism of action and anticipate possible side effects to avoid costly clinical failures. This knowledge is increasingly important as the prevalence of polypharmacy expands to include drugs that engage multiple targets. This review provides a succinct overview of several recent approaches that employ genetics, proteomics, expression profiling or bioinformatics procedures for the systematic characterization of the targets of bioactive compounds. The continuous improvement and advancement of existing technologies is critically discussed and we offer a perspective on the future of innovative emerging new generation technologies. Copyright 2009 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2009        PMID: 20004028     DOI: 10.1016/j.tips.2009.11.002

Source DB:  PubMed          Journal:  Trends Pharmacol Sci        ISSN: 0165-6147            Impact factor:   14.819


  26 in total

1.  Superessential reactions in metabolic networks.

Authors:  Aditya Barve; João Frederico Matias Rodrigues; Andreas Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-16       Impact factor: 11.205

2.  Target identification by chromatographic co-elution: monitoring of drug-protein interactions without immobilization or chemical derivatization.

Authors:  Janet N Y Chan; Dajana Vuckovic; Lekha Sleno; Jonathan B Olsen; Oxana Pogoutse; Pierre Havugimana; Johannes A Hewel; Navgeet Bajaj; Yale Wang; Marcel F Musteata; Corey Nislow; Andrew Emili
Journal:  Mol Cell Proteomics       Date:  2012-02-22       Impact factor: 5.911

3.  Study of intra-inter species protein-protein interactions for potential drug targets identification and subsequent drug design for Escherichia coli O104:H4 C277-11.

Authors:  Shakhinur Islam Mondal; Zabed Mahmud; Montasir Elahi; Arzuba Akter; Nurnabi Azad Jewel; Md Muzahidul Islam; Sabiha Ferdous; Taisei Kikuchi
Journal:  In Silico Pharmacol       Date:  2017-04-11

4.  Marine natural products: a new wave of drugs?

Authors:  Rana Montaser; Hendrik Luesch
Journal:  Future Med Chem       Date:  2011-09       Impact factor: 3.808

5.  A yeast-based screen reveals that sulfasalazine inhibits tetrahydrobiopterin biosynthesis.

Authors:  Christopher Chidley; Hirohito Haruki; Miriam Grønlund Pedersen; Evelyne Muller; Kai Johnsson
Journal:  Nat Chem Biol       Date:  2011-04-17       Impact factor: 15.040

6.  Charting a course for genomic medicine from base pairs to bedside.

Authors:  Eric D Green; Mark S Guyer
Journal:  Nature       Date:  2011-02-10       Impact factor: 49.962

7.  Opposing effects of target overexpression reveal drug mechanisms.

Authors:  Adam C Palmer; Roy Kishony
Journal:  Nat Commun       Date:  2014-07-01       Impact factor: 14.919

Review 8.  Chemical biology applied to the study of bacterial pathogens.

Authors:  Rebecca Anthouard; Victor J DiRita
Journal:  Infect Immun       Date:  2014-11-17       Impact factor: 3.441

Review 9.  Methods to validate Hsp90 inhibitor specificity, to identify off-target effects, and to rethink approaches for further clinical development.

Authors:  Len Neckers; Brian Blagg; Timothy Haystead; Jane B Trepel; Luke Whitesell; Didier Picard
Journal:  Cell Stress Chaperones       Date:  2018-02-01       Impact factor: 3.667

Review 10.  A survey of yeast genomic assays for drug and target discovery.

Authors:  Andrew M Smith; Ron Ammar; Corey Nislow; Guri Giaever
Journal:  Pharmacol Ther       Date:  2010-05-28       Impact factor: 12.310

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