Literature DB >> 20546776

A survey of yeast genomic assays for drug and target discovery.

Andrew M Smith1, Ron Ammar, Corey Nislow, Guri Giaever.   

Abstract

Over the past decade, the development and application of chemical genomic assays using the model organism Saccharomyces cerevisiae has provided powerful methods to identify the mechanism of action of known drugs and novel small molecules in vivo. These assays identify drug target candidates, genes involved in buffering drug target pathways and also help to define the general cellular response to small molecules. In this review, we examine current yeast chemical genomic assays and summarize the potential applications of each approach. (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20546776      PMCID: PMC2923554          DOI: 10.1016/j.pharmthera.2010.04.012

Source DB:  PubMed          Journal:  Pharmacol Ther        ISSN: 0163-7258            Impact factor:   12.310


  115 in total

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Journal:  Science       Date:  2000-03-17       Impact factor: 47.728

Review 2.  Systems biology in drug discovery.

Authors:  Eugene C Butcher; Ellen L Berg; Eric J Kunkel
Journal:  Nat Biotechnol       Date:  2004-10       Impact factor: 54.908

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Journal:  Nat Genet       Date:  2007-01-07       Impact factor: 38.330

4.  Genomic profiling of drug sensitivities via induced haploinsufficiency.

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Journal:  Nat Genet       Date:  1999-03       Impact factor: 38.330

5.  Targets for cell cycle arrest by the immunosuppressant rapamycin in yeast.

Authors:  J Heitman; N R Movva; M N Hall
Journal:  Science       Date:  1991-08-23       Impact factor: 47.728

Review 6.  Future novel single agent and combination therapies.

Authors:  Diana Cirstea; Sonia Vallet; Noopur Raje
Journal:  Cancer J       Date:  2009 Nov-Dec       Impact factor: 3.360

7.  A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds.

Authors:  Cheuk Hei Ho; Leslie Magtanong; Sarah L Barker; David Gresham; Shinichi Nishimura; Paramasivam Natarajan; Judice L Y Koh; Justin Porter; Christopher A Gray; Raymond J Andersen; Guri Giaever; Corey Nislow; Brenda Andrews; David Botstein; Todd R Graham; Minoru Yoshida; Charles Boone
Journal:  Nat Biotechnol       Date:  2009-04-06       Impact factor: 54.908

8.  An antifungal agent inhibits an aminoacyl-tRNA synthetase by trapping tRNA in the editing site.

Authors:  Fernando L Rock; Weimin Mao; Anya Yaremchuk; Mikhail Tukalo; Thibaut Crépin; Huchen Zhou; Yong-Kang Zhang; Vincent Hernandez; Tsutomu Akama; Stephen J Baker; Jacob J Plattner; Lucy Shapiro; Susan A Martinis; Stephen J Benkovic; Stephen Cusack; M R K Alley
Journal:  Science       Date:  2007-06-22       Impact factor: 47.728

Review 9.  Rescuing yeast mutants with human genes.

Authors:  Michael J Osborn; J Ross Miller
Journal:  Brief Funct Genomic Proteomic       Date:  2007-08-13

Review 10.  Unified inventory of established and putative transporters encoded within the complete genome of Saccharomyces cerevisiae.

Authors:  I T Paulsen; M K Sliwinski; B Nelissen; A Goffeau; M H Saier
Journal:  FEBS Lett       Date:  1998-06-23       Impact factor: 4.124

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  43 in total

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Review 2.  Genetic Approaches to Facilitate Antibacterial Drug Development.

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Journal:  Cold Spring Harb Perspect Med       Date:  2015-02-13       Impact factor: 6.915

Review 3.  The re-emergence of natural products for drug discovery in the genomics era.

Authors:  Alan L Harvey; RuAngelie Edrada-Ebel; Ronald J Quinn
Journal:  Nat Rev Drug Discov       Date:  2015-01-23       Impact factor: 84.694

4.  Nitrate and Phosphate Transporters Rescue Fluoride Toxicity in Yeast.

Authors:  Nichole R Johnston; Scott A Strobel
Journal:  Chem Res Toxicol       Date:  2019-10-16       Impact factor: 3.739

5.  SwissTargetPrediction: a web server for target prediction of bioactive small molecules.

Authors:  David Gfeller; Aurélien Grosdidier; Matthias Wirth; Antoine Daina; Olivier Michielin; Vincent Zoete
Journal:  Nucleic Acids Res       Date:  2014-05-03       Impact factor: 16.971

6.  Amino acid-derived 1,2-benzisothiazolinone derivatives as novel small-molecule antifungal inhibitors: identification of potential genetic targets.

Authors:  Deepu Alex; Francoise Gay-Andrieu; Jared May; Linta Thampi; Dengfeng Dou; Aileen Mooney; William Groutas; Richard Calderone
Journal:  Antimicrob Agents Chemother       Date:  2012-06-11       Impact factor: 5.191

7.  Chemogenomic study of gemcitabine using Saccharomyces cerevisiae as model cell-molecular insights about chemoresistance.

Authors:  Lucas de Sousa Cavalcante; Tales A Costa-Silva; Tiago Antônio Souza; Susan Ienne; Gisele Monteiro
Journal:  Braz J Microbiol       Date:  2019-09-12       Impact factor: 2.476

8.  Inhibition of mitochondrial translation as a therapeutic strategy for human acute myeloid leukemia.

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Journal:  Cancer Cell       Date:  2011-11-15       Impact factor: 31.743

9.  The Monoterpene Carvacrol Generates Endoplasmic Reticulum Stress in the Pathogenic Fungus Candida albicans.

Authors:  Julien Chaillot; Faiza Tebbji; Adnane Remmal; Charlie Boone; Grant W Brown; Mohammed Bellaoui; Adnane Sellam
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10.  Chemical genomic screening of a Saccharomyces cerevisiae genomewide mutant collection reveals genes required for defense against four antimicrobial peptides derived from proteins found in human saliva.

Authors:  Maciej Lis; Sanjay Bhatt; Nathan E Schoenly; Anna Y Lee; Corey Nislow; Libuse A Bobek
Journal:  Antimicrob Agents Chemother       Date:  2012-12-03       Impact factor: 5.191

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