Literature DB >> 20000708

User-loaded SlipChip for equipment-free multiplexed nanoliter-scale experiments.

Liang Li1, Wenbin Du, Rustem Ismagilov.   

Abstract

This paper describes a microfluidic approach to perform multiplexed nanoliter-scale experiments by combining a sample with multiple different reagents, each at multiple mixing ratios. This approach employs a user-loaded, equipment-free SlipChip. The mixing ratios, characterized by diluting a fluorescent dye, could be controlled by the volume of each of the combined wells. The SlipChip design was validated on an approximately 12 nL scale by screening the conditions for crystallization of glutaryl-CoA dehydrogenase from Burkholderia pseudomallei against 48 different reagents; each reagent was tested at 11 different mixing ratios, for a total of 528 crystallization trials. The total consumption of the protein sample was approximately 10 microL. Conditions for crystallization were successfully identified. The crystallization experiments were successfully scaled up in well plates using the conditions identified in the SlipChip. Crystals were characterized by X-ray diffraction and provided a protein structure in a different space group and at a higher resolution than the structure obtained by conventional methods. In this work, this user-loaded SlipChip has been shown to reliably handle fluids of diverse physicochemical properties, such as viscosities and surface tensions. Quantitative measurements of fluorescent intensities and high-resolution imaging were straighforward to perform in these glass SlipChips. Surface chemistry was controlled using fluorinated lubricating fluid, analogous to the fluorinated carrier fluid used in plug-based crystallization. Thus, we expect this approach to be valuable in a number of areas beyond protein crystallization, especially those areas where droplet-based microfluidic systems have demonstrated successes, including measurements of enzyme kinetics and blood coagulation, cell-based assays, and chemical reactions.

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Year:  2010        PMID: 20000708      PMCID: PMC2802657          DOI: 10.1021/ja908555n

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  42 in total

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Authors:  David J Beebe; Glennys A Mensing; Glenn M Walker
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Review 2.  Control and detection of chemical reactions in microfluidic systems.

Authors:  Andrew J DeMello
Journal:  Nature       Date:  2006-07-27       Impact factor: 49.962

3.  On-chip titration of an anticoagulant argatroban and determination of the clotting time within whole blood or plasma using a plug-based microfluidic system.

Authors:  Helen Song; Hung-Wing Li; Matthew S Munson; Thuong G Van Ha; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2006-07-15       Impact factor: 6.986

Review 4.  Reactions in droplets in microfluidic channels.

Authors:  Helen Song; Delai L Chen; Rustem F Ismagilov
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-13       Impact factor: 15.336

5.  The chemistrode: a droplet-based microfluidic device for stimulation and recording with high temporal, spatial, and chemical resolution.

Authors:  Delai Chen; Wenbin Du; Ying Liu; Weishan Liu; Andrey Kuznetsov; Felipe E Mendez; Louis H Philipson; Rustem F Ismagilov
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-30       Impact factor: 11.205

6.  On-chip, real-time, single-copy polymerase chain reaction in picoliter droplets.

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Review 7.  High-throughput screening. Advances in robotics and miniturization continue to accelerate drug lead identification.

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Journal:  Nat Biotechnol       Date:  1998-05       Impact factor: 54.908

8.  Controlling nonspecific protein adsorption in a plug-based microfluidic system by controlling interfacial chemistry using fluorous-phase surfactants.

Authors:  L Spencer Roach; Helen Song; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2005-02-01       Impact factor: 6.986

Review 9.  Multiplex polymerase chain reaction: a practical approach.

Authors:  P Markoulatos; N Siafakas; M Moncany
Journal:  J Clin Lab Anal       Date:  2002       Impact factor: 2.352

10.  Laterally mobile, functionalized self-assembled monolayers at the fluorous-aqueous interface in a plug-based microfluidic system: characterization and testing with membrane protein crystallization.

Authors:  Jason E Kreutz; Liang Li; L Spencer Roach; Takuji Hatakeyama; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2009-05-06       Impact factor: 15.419

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  22 in total

1.  Theoretical design and analysis of multivolume digital assays with wide dynamic range validated experimentally with microfluidic digital PCR.

Authors:  Jason E Kreutz; Todd Munson; Toan Huynh; Feng Shen; Wenbin Du; Rustem F Ismagilov
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2.  Two-dimensional arrays of cell-laden polymer hydrogel modules.

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Journal:  Biomicrofluidics       Date:  2016-01-21       Impact factor: 2.800

3.  SlipChip for immunoassays in nanoliter volumes.

Authors:  Weishan Liu; Delai Chen; Wenbin Du; Kevin P Nichols; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2010-04-15       Impact factor: 6.986

4.  Individually addressable arrays of replica microbial cultures enabled by splitting SlipChips.

Authors:  Liang Ma; Sujit S Datta; Mikhail A Karymov; Qichao Pan; Stefano Begolo; Rustem F Ismagilov
Journal:  Integr Biol (Camb)       Date:  2014-08       Impact factor: 2.192

Review 5.  Slip-driven microfluidic devices for nucleic acid analysis.

Authors:  Weiyuan Lyu; Mengchao Yu; Haijun Qu; Ziqing Yu; Wenbin Du; Feng Shen
Journal:  Biomicrofluidics       Date:  2019-07-12       Impact factor: 2.800

6.  User-defined local stimulation of live tissue through a movable microfluidic port.

Authors:  Megan A Catterton; Austin F Dunn; Rebecca R Pompano
Journal:  Lab Chip       Date:  2018-07-10       Impact factor: 6.799

7.  The potential impact of droplet microfluidics in biology.

Authors:  Thomas Schneider; Jason Kreutz; Daniel T Chiu
Journal:  Anal Chem       Date:  2013-03-15       Impact factor: 6.986

8.  Nanoliter multiplex PCR arrays on a SlipChip.

Authors:  Feng Shen; Wenbin Du; Elena K Davydova; Mikhail A Karymov; Janmajay Pandey; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2010-06-01       Impact factor: 6.986

9.  Digital PCR on a SlipChip.

Authors:  Feng Shen; Wenbin Du; Jason E Kreutz; Alice Fok; Rustem F Ismagilov
Journal:  Lab Chip       Date:  2010-07-01       Impact factor: 6.799

10.  Mechanistic evaluation of the pros and cons of digital RT-LAMP for HIV-1 viral load quantification on a microfluidic device and improved efficiency via a two-step digital protocol.

Authors:  Bing Sun; Feng Shen; Stephanie E McCalla; Jason E Kreutz; Mikhail A Karymov; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2013-01-16       Impact factor: 6.986

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