Literature DB >> 19996178

Dynamics of the Dorsal morphogen gradient.

Jitendra S Kanodia1, Richa Rikhy, Yoosik Kim, Viktor K Lund, Robert DeLotto, Jennifer Lippincott-Schwartz, Stanislav Y Shvartsman.   

Abstract

The dorsoventral (DV) patterning of the Drosophila embryo depends on the nuclear localization gradient of Dorsal (Dl), a protein related to the mammalian NF-kappaB transcription factors. Current understanding of how the Dl gradient works has been derived from studies of its transcriptional interpretation, but the gradient itself has not been quantified. In particular, it is not known whether the Dl gradient is stable or dynamic during the DV patterning of the embryo. To address this question, we developed a mathematical model of the Dl gradient and constrained its parameters by experimental data. Based on our computational analysis, we predict that the Dl gradient is dynamic and, to a first approximation, can be described as a concentration profile with increasing amplitude and constant shape. These time-dependent properties of the Dl gradient are different from those of the Bicoid and MAPK phosphorylation gradients, which pattern the anterior and terminal regions of the embryo. Specifically, the gradient of the nuclear levels of Bicoid is stable, whereas the pattern of MAPK phosphorylation changes in both shape and amplitude. We attribute these striking differences in the dynamics of maternal morphogen gradients to the differences in the initial conditions and chemistries of the anterior, DV, and terminal systems.

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Year:  2009        PMID: 19996178      PMCID: PMC2799810          DOI: 10.1073/pnas.0912395106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

Review 1.  Dorsal gradient networks in the Drosophila embryo.

Authors:  Angelike Stathopoulos; Michael Levine
Journal:  Dev Biol       Date:  2002-06-01       Impact factor: 3.582

2.  A regulatory code for neurogenic gene expression in the Drosophila embryo.

Authors:  Michele Markstein; Robert Zinzen; Peter Markstein; Ka-Ping Yee; Albert Erives; Angela Stathopoulos; Michael Levine
Journal:  Development       Date:  2004-05       Impact factor: 6.868

3.  A gradient of nuclear localization of the dorsal protein determines dorsoventral pattern in the Drosophila embryo.

Authors:  S Roth; D Stein; C Nüsslein-Volhard
Journal:  Cell       Date:  1989-12-22       Impact factor: 41.582

4.  Quantitative analysis of binding motifs mediating diverse spatial readouts of the Dorsal gradient in the Drosophila embryo.

Authors:  Dmitri Papatsenko; Michael Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-28       Impact factor: 11.205

5.  The graded distribution of the dorsal morphogen is initiated by selective nuclear transport in Drosophila.

Authors:  C A Rushlow; K Han; J L Manley; M Levine
Journal:  Cell       Date:  1989-12-22       Impact factor: 41.582

6.  Relocalization of the dorsal protein from the cytoplasm to the nucleus correlates with its function.

Authors:  R Steward
Journal:  Cell       Date:  1989-12-22       Impact factor: 41.582

7.  Convergence of dorsal, dpp, and egfr signaling pathways subdivides the drosophila neuroectoderm into three dorsal-ventral columns.

Authors:  T von Ohlen; C Q Doe
Journal:  Dev Biol       Date:  2000-08-15       Impact factor: 3.582

8.  Design flexibility in cis-regulatory control of gene expression: synthetic and comparative evidence.

Authors:  Louisa M Liberman; Angelike Stathopoulos
Journal:  Dev Biol       Date:  2008-12-25       Impact factor: 3.582

9.  Linear signaling in the Toll-Dorsal pathway of Drosophila: activated Pelle kinase specifies all threshold outputs of gene expression while the bHLH protein Twist specifies a subset.

Authors:  Angelike Stathopoulos; Michael Levine
Journal:  Development       Date:  2002-07       Impact factor: 6.868

10.  Studies of nuclear and cytoplasmic behaviour during the five mitotic cycles that precede gastrulation in Drosophila embryogenesis.

Authors:  V E Foe; B M Alberts
Journal:  J Cell Sci       Date:  1983-05       Impact factor: 5.285

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  55 in total

1.  Coding design of positional information for robust morphogenesis.

Authors:  Yoshihiro Morishita; Yoh Iwasa
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

2.  A computational statistics approach for estimating the spatial range of morphogen gradients.

Authors:  Jitendra S Kanodia; Yoosik Kim; Raju Tomer; Zia Khan; Kwanghun Chung; John D Storey; Hang Lu; Philipp J Keller; Stanislav Y Shvartsman
Journal:  Development       Date:  2011-10-17       Impact factor: 6.868

3.  Multiscale modeling of diffusion in the early Drosophila embryo.

Authors:  Christine Sample; Stanislav Y Shvartsman
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

Review 4.  Modelling the Bicoid gradient.

Authors:  Oliver Grimm; Mathieu Coppey; Eric Wieschaus
Journal:  Development       Date:  2010-07       Impact factor: 6.868

5.  MEX-5 enrichment in the C. elegans early embryo mediated by differential diffusion.

Authors:  Brian R Daniels; Terrence M Dobrowsky; Edward M Perkins; Sean X Sun; Denis Wirtz
Journal:  Development       Date:  2010-08-01       Impact factor: 6.868

6.  Multiscale diffusion in the mitotic Drosophila melanogaster syncytial blastoderm.

Authors:  Brian R Daniels; Richa Rikhy; Malte Renz; Terrence M Dobrowsky; Jennifer Lippincott-Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-16       Impact factor: 11.205

7.  Temporal integration of inductive cues on the way to gastrulation.

Authors:  Sarah McFann; Sayantan Dutta; Jared E Toettcher; Stanislav Y Shvartsman
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

8.  A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila.

Authors:  Claudio D T Barros; Maira A Cardoso; Paulo M Bisch; Helena M Araujo; Francisco J P Lopes
Journal:  PLoS Comput Biol       Date:  2021-05-27       Impact factor: 4.475

Review 9.  Comparative approaches to the study of physiology: Drosophila as a physiological tool.

Authors:  Wendi S Neckameyer; Kathryn J Argue
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2012-12-05       Impact factor: 3.619

10.  Variation in the dorsal gradient distribution is a source for modified scaling of germ layers in Drosophila.

Authors:  Juan Sebastian Chahda; Rui Sousa-Neves; Claudia Mieko Mizutani
Journal:  Curr Biol       Date:  2013-04-11       Impact factor: 10.834

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