Literature DB >> 34043616

A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila.

Claudio D T Barros1, Maira A Cardoso2,3, Paulo M Bisch2, Helena M Araujo3, Francisco J P Lopes4.   

Abstract

Dorsal-ventral patterning of the Drosophila embryo depends on the NFκB superfamily transcription factor Dorsal (Dl). Toll receptor activation signals for degradation of the IκB inhibitor Cactus (Cact), leading to a ventral-to-dorsal nuclear Dl gradient. Cact is critical for Dl nuclear import, as it binds to and prevents Dl from entering the nuclei. Quantitative analysis of cact mutants revealed an additional Cact function to promote Dl nuclear translocation in ventral regions of the embryo. To investigate this dual Cact role, we developed a predictive model based on a reaction-diffusion regulatory network. This network distinguishes non-uniform Toll-dependent Dl nuclear import and Cact degradation, from the Toll-independent processes of Cact degradation and reversible nuclear-cytoplasmic Dl flow. In addition, it incorporates translational control of Cact levels by Dl. Our model successfully reproduces wild-type data and emulates the Dl nuclear gradient in mutant dl and cact allelic combinations. Our results indicate that the dual role of Cact depends on the dynamics of Dl-Cact trimers along the dorsal-ventral axis: In the absence of Toll activation, free Dl-Cact trimers retain Dl in the cytoplasm, limiting the flow of Dl into the nucleus; in ventral-lateral regions, Dl-Cact trimers are recruited by Toll activation into predominant signaling complexes and promote Dl nuclear translocation. Simulations suggest that the balance between Toll-dependent and Toll-independent processes are key to this dynamics and reproduce the full assortment of Cact effects. Considering the high evolutionary conservation of these pathways, our analysis should contribute to understanding NFκB/c-Rel activation in other contexts such as in the vertebrate immune system and disease.

Entities:  

Year:  2021        PMID: 34043616      PMCID: PMC8189453          DOI: 10.1371/journal.pcbi.1009040

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  62 in total

1.  Cactus-independent regulation of Dorsal nuclear import by the ventral signal.

Authors:  E A Drier; S Govind; R Steward
Journal:  Curr Biol       Date:  2000-01-13       Impact factor: 10.834

2.  A gradient of cactus protein degradation establishes dorsoventral polarity in the Drosophila embryo.

Authors:  M Reach; R L Galindo; P Towb; J L Allen; M Karin; S A Wasserman
Journal:  Dev Biol       Date:  1996-11-25       Impact factor: 3.582

3.  A novel function for the IκB inhibitor Cactus in promoting Dorsal nuclear localization and activity in the Drosophila embryo.

Authors:  Maira Arruda Cardoso; Marcio Fontenele; Bomyi Lim; Paulo Mascarello Bisch; Stanislav Y Shvartsman; Helena Marcolla Araujo
Journal:  Development       Date:  2017-07-13       Impact factor: 6.868

4.  pelle encodes a protein kinase required to establish dorsoventral polarity in the Drosophila embryo.

Authors:  C A Shelton; S A Wasserman
Journal:  Cell       Date:  1993-02-26       Impact factor: 41.582

5.  Cactus protein degradation mediates Drosophila dorsal-ventral signaling.

Authors:  M P Belvin; Y Jin; K V Anderson
Journal:  Genes Dev       Date:  1995-04-01       Impact factor: 11.361

6.  The dorsal protein enhances the biosynthesis and stability of the Drosophila I kappa B homologue cactus.

Authors:  K Kubota; N J Gay
Journal:  Nucleic Acids Res       Date:  1995-08-25       Impact factor: 16.971

7.  RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo.

Authors:  Julia Zeitlinger; Alexander Stark; Manolis Kellis; Joung-Woo Hong; Sergei Nechaev; Karen Adelman; Michael Levine; Richard A Young
Journal:  Nat Genet       Date:  2007-11-11       Impact factor: 38.330

8.  IkappaBepsilon provides negative feedback to control NF-kappaB oscillations, signaling dynamics, and inflammatory gene expression.

Authors:  Jeffrey D Kearns; Soumen Basak; Shannon L Werner; Christine S Huang; Alexander Hoffmann
Journal:  J Cell Biol       Date:  2006-05-30       Impact factor: 10.539

9.  Cell-surface localization of Pellino antagonizes Toll-mediated innate immune signalling by controlling MyD88 turnover in Drosophila.

Authors:  Shanming Ji; Ming Sun; Xiudeng Zheng; Lin Li; Liwei Sun; Dahua Chen; Qinmiao Sun
Journal:  Nat Commun       Date:  2014-03-17       Impact factor: 14.919

10.  A microfluidic array for large-scale ordering and orientation of embryos.

Authors:  Kwanghun Chung; Yoosik Kim; Jitendra S Kanodia; Emily Gong; Stanislav Y Shvartsman; Hang Lu
Journal:  Nat Methods       Date:  2010-12-26       Impact factor: 28.547

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