Literature DB >> 19966001

Coexistence of two different photosynthetic operons in Citromicrobium bathyomarinum JL354 as revealed by whole-genome sequencing.

Nianzhi Jiao1, Rui Zhang, Qiang Zheng.   

Abstract

Citromicrobium bathyomarinum is a bacteriochlorophyll a-containing aerobic anoxygenic phototrophic bacterium. Here, we report the draft genome sequence of C. bathyomarinum JL354, which was the first C. bathyomarinum strain isolated from a euphotic marine environment. The JL354 genome sequence reveals, for the first time, the coexistence of two different photosynthetic operons in a single strain.

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Year:  2009        PMID： 19966001      PMCID： PMC2812980          DOI： 10.1128/JB.01504-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  18 in total

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Journal:  Appl Environ Microbiol       Date:  2007-05-11       Impact factor: 4.792

3.  Rapid growth rates of aerobic anoxygenic phototrophs in the ocean.

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Journal:  Environ Microbiol       Date:  2007-10       Impact factor: 5.491

Review 4.  Aerobic anoxygenic phototrophic bacteria.

Authors:  V V Yurkov; J T Beatty
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

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Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-13       Impact factor: 11.205

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8.  KEGG for linking genomes to life and the environment.

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Journal:  Nucleic Acids Res       Date:  2007-12-12       Impact factor: 16.971

9.  GenBank.

Authors:  Dennis A Benson; Ilene Karsch-Mizrachi; David J Lipman; James Ostell; David L Wheeler
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10.  The photosynthetic apparatus and its regulation in the aerobic gammaproteobacterium Congregibacter litoralis gen. nov., sp. nov.

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  13 in total

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Journal:  Appl Environ Microbiol       Date:  2016-11-21       Impact factor: 4.792

2.  Picoplankton Bloom in Global South? A High Fraction of Aerobic Anoxygenic Phototrophic Bacteria in Metagenomes from a Coastal Bay (Arraial do Cabo--Brazil).

Authors:  Rafael R C Cuadrat; Isabel Ferrera; Hans-Peter Grossart; Alberto M R Dávila
Journal:  OMICS       Date:  2016-02

3.  Genome sequence of Citromicrobium strain JLT1363, isolated from the South China Sea.

Authors:  Qiang Zheng; Rui Zhang; Nianzhi Jiao
Journal:  J Bacteriol       Date:  2011-02-11       Impact factor: 3.490

4.  Cloning, expression and characterization of a halotolerant esterase from a marine bacterium Pelagibacterium halotolerans B2T.

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Journal:  Extremophiles       Date:  2012-04-06       Impact factor: 2.395

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Authors:  J T Csotonyi; E Stackebrandt; J Swiderski; P Schumann; V Yurkov
Journal:  Photosynth Res       Date:  2011-02-10       Impact factor: 3.573

6.  Unusual features in the photosynthetic machinery of Halorhodospira halochloris DSM 1059 revealed by complete genome sequencing.

Authors:  Yusuke Tsukatani; Yuu Hirose; Jiro Harada; Chinatsu Yonekawa; Hitoshi Tamiaki
Journal:  Photosynth Res       Date:  2019-01-30       Impact factor: 3.573

7.  Genomic makeup of the marine flavobacterium Nonlabens (Donghaeana) dokdonensis and identification of a novel class of rhodopsins.

Authors:  Soon-Kyeong Kwon; Byung Kwon Kim; Ju Yeon Song; Min-Jung Kwak; Choong Hoon Lee; Jung-Hoon Yoon; Tae Kwang Oh; Jihyun F Kim
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

8.  Distribution and functions of TonB-dependent transporters in marine bacteria and environments: implications for dissolved organic matter utilization.

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Journal:  PLoS One       Date:  2012-07-19       Impact factor: 3.240

9.  Diverse arrangement of photosynthetic gene clusters in aerobic anoxygenic phototrophic bacteria.

Authors:  Qiang Zheng; Rui Zhang; Michal Koblížek; Ekaterina N Boldareva; Vladimir Yurkov; Shi Yan; Nianzhi Jiao
Journal:  PLoS One       Date:  2011-09-20       Impact factor: 3.240

10.  Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein.

Authors:  Thomas Riedel; Laura Gómez-Consarnau; Jürgen Tomasch; Madeleine Martin; Michael Jarek; José M González; Stefan Spring; Meike Rohlfs; Thorsten Brinkhoff; Heribert Cypionka; Markus Göker; Anne Fiebig; Johannes Klein; Alexander Goesmann; Jed A Fuhrman; Irene Wagner-Döbler
Journal:  PLoS One       Date:  2013-03-04       Impact factor: 3.240
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