Literature DB >> 19962440

Deconvolution in diffusion spectrum imaging.

Erick Jorge Canales-Rodríguez1, Yasser Iturria-Medina, Yasser Alemán-Gómez, Lester Melie-García.   

Abstract

Diffusion spectrum magnetic resonance imaging (DSI) allows the estimation of the displacement probability density function (pdf) of water molecules, which contain valuable information about the microgeometry of the medium where the diffusion process occurs. It provides a more general approach to disentangle complex fiber structures in biological tissues because it does not assume any particular model of diffusion; even so, it has a number of limitations that remain unstudied. For instance, the theoretical model used to compute the displacement pdf is based on a Fourier transformation defined in the whole measurement space; however, in practice, it is computed using discrete signals with a finite support. As a consequence, the displacement pdf obtained from the experiments is the convolution between the true pdf and a point spread function (PSF) that completely depends on the experimental sampling scheme. In this work, a general framework to rectify and decontaminate the displacement pdf reconstructed from DSI is introduced. This framework is based on model-free deconvolution techniques that allow obtaining clearer and sharper DSI estimates. The method was tested in synthetic data as well as in real data measured from a healthy human volunteer. The results demonstrated that the angular resolution of DSI can be increased, potentially revealing new real fiber components and reducing both the artefactual peaks and the uncertainty of the local diffusion orientational distribution. Furthermore, the deconvolution process provides scalar maps of quantities derived from the propagator, such as the zero displacement probability, with higher tissue contrast. Copyright (c) 2009 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2009        PMID: 19962440     DOI: 10.1016/j.neuroimage.2009.11.066

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  10 in total

1.  Pushing the limits of in vivo diffusion MRI for the Human Connectome Project.

Authors:  K Setsompop; R Kimmlingen; E Eberlein; T Witzel; J Cohen-Adad; J A McNab; B Keil; M D Tisdall; P Hoecht; P Dietz; S F Cauley; V Tountcheva; V Matschl; V H Lenz; K Heberlein; A Potthast; H Thein; J Van Horn; A Toga; F Schmitt; D Lehne; B R Rosen; V Wedeen; L L Wald
Journal:  Neuroimage       Date:  2013-05-24       Impact factor: 6.556

2.  Versatile, robust, and efficient tractography with constrained higher-order tensor fODFs.

Authors:  Michael Ankele; Lek-Heng Lim; Samuel Groeschel; Thomas Schultz
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-04-29       Impact factor: 2.924

3.  Estimation of white matter fiber parameters from compressed multiresolution diffusion MRI using sparse Bayesian learning.

Authors:  Pramod Kumar Pisharady; Stamatios N Sotiropoulos; Julio M Duarte-Carvajalino; Guillermo Sapiro; Christophe Lenglet
Journal:  Neuroimage       Date:  2017-06-29       Impact factor: 6.556

4.  Bessel Fourier Orientation Reconstruction (BFOR): an analytical diffusion propagator reconstruction for hybrid diffusion imaging and computation of q-space indices.

Authors:  A Pasha Hosseinbor; Moo K Chung; Yu-Chien Wu; Andrew L Alexander
Journal:  Neuroimage       Date:  2012-08-31       Impact factor: 6.556

5.  Model-based analysis of multishell diffusion MR data for tractography: how to get over fitting problems.

Authors:  Saad Jbabdi; Stamatios N Sotiropoulos; Alexander M Savio; Manuel Graña; Timothy E J Behrens
Journal:  Magn Reson Med       Date:  2012-02-14       Impact factor: 4.668

6.  Generalized diffusion spectrum magnetic resonance imaging (GDSI) for model-free reconstruction of the ensemble average propagator.

Authors:  Qiyuan Tian; Grant Yang; Christoph Leuze; Ariel Rokem; Brian L Edlow; Jennifer A McNab
Journal:  Neuroimage       Date:  2019-01-23       Impact factor: 6.556

7.  A Sparse Bayesian Learning Algorithm for White Matter Parameter Estimation from Compressed Multi-shell Diffusion MRI.

Authors:  Pramod Kumar Pisharady; Stamatios N Sotiropoulos; Guillermo Sapiro; Christophe Lenglet
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

8.  Q-space truncation and sampling in diffusion spectrum imaging.

Authors:  Qiyuan Tian; Ariel Rokem; Rebecca D Folkerth; Aapo Nummenmaa; Qiuyun Fan; Brian L Edlow; Jennifer A McNab
Journal:  Magn Reson Med       Date:  2016-01-13       Impact factor: 4.668

9.  Spherical Deconvolution of Multichannel Diffusion MRI Data with Non-Gaussian Noise Models and Spatial Regularization.

Authors:  Erick J Canales-Rodríguez; Alessandro Daducci; Stamatios N Sotiropoulos; Emmanuel Caruyer; Santiago Aja-Fernández; Joaquim Radua; Jesús M Yurramendi Mendizabal; Yasser Iturria-Medina; Lester Melie-García; Yasser Alemán-Gómez; Jean-Philippe Thiran; Salvador Sarró; Edith Pomarol-Clotet; Raymond Salvador
Journal:  PLoS One       Date:  2015-10-15       Impact factor: 3.240

10.  Dipy, a library for the analysis of diffusion MRI data.

Authors:  Eleftherios Garyfallidis; Matthew Brett; Bagrat Amirbekian; Ariel Rokem; Stefan van der Walt; Maxime Descoteaux; Ian Nimmo-Smith
Journal:  Front Neuroinform       Date:  2014-02-21       Impact factor: 4.081

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.