Literature DB >> 19955182

No Splicing, no dicing: non-proteolytic roles of the ubiquitin-proteasome system in transcription.

Thomas Kodadek1.   

Abstract

The ubiquitin-proteasome pathway (UPP) is responsible for most programmed turnover of proteins in eukaryotic cells, and this activity has been known for some time to be involved in transcriptional regulation. More recently, intersections of the UPP and transcription have been discovered that are not proteolytic in nature and appear to revolve around the chaperonin-like activities of the ATPases in the 19 S regulatory subunit of the proteasome. Moreover, monoubiquitylation, which does not signal degradation, has been found to be a key modification of many transcription factors and histones. These various non-proteolytic roles of the UPP in transcription are reviewed here, and plausible mechanistic models are discussed.

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Year:  2009        PMID: 19955182      PMCID: PMC2807279          DOI: 10.1074/jbc.R109.077883

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  49 in total

1.  Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3.

Authors:  Elena Ezhkova; William P Tansey
Journal:  Mol Cell       Date:  2004-02-13       Impact factor: 17.970

Review 2.  The ubiquitin system.

Authors:  A Hershko; A Ciechanover
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

Review 3.  Structure and functions of the 20S and 26S proteasomes.

Authors:  O Coux; K Tanaka; A L Goldberg
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

4.  FACT, a factor that facilitates transcript elongation through nucleosomes.

Authors:  G Orphanides; G LeRoy; C H Chang; D S Luse; D Reinberg
Journal:  Cell       Date:  1998-01-09       Impact factor: 41.582

5.  Quantitation of putative activator-target affinities predicts transcriptional activating potentials.

Authors:  Y Wu; R J Reece; M Ptashne
Journal:  EMBO J       Date:  1996-08-01       Impact factor: 11.598

6.  The XPB subunit of repair/transcription factor TFIIH directly interacts with SUG1, a subunit of the 26S proteasome and putative transcription factor.

Authors:  G Weeda; M Rossignol; R A Fraser; G S Winkler; W Vermeulen; L J van 't Veer; L Ma; J H Hoeijmakers; J M Egly
Journal:  Nucleic Acids Res       Date:  1997-06-15       Impact factor: 16.971

7.  Subcellular localization, stoichiometry, and protein levels of 26 S proteasome subunits in yeast.

Authors:  S J Russell; K A Steger; S A Johnston
Journal:  J Biol Chem       Date:  1999-07-30       Impact factor: 5.157

8.  Disassembly of the Mu transposase tetramer by the ClpX chaperone.

Authors:  I Levchenko; L Luo; T A Baker
Journal:  Genes Dev       Date:  1995-10-01       Impact factor: 11.361

9.  Identification of the gal4 suppressor Sug1 as a subunit of the yeast 26S proteasome.

Authors:  D M Rubin; O Coux; I Wefes; C Hengartner; R A Young; A L Goldberg; D Finley
Journal:  Nature       Date:  1996-02-15       Impact factor: 49.962

10.  Mutations in the second largest subunit of RNA polymerase II cause 6-azauracil sensitivity in yeast and increased transcriptional arrest in vitro.

Authors:  W Powell; D Reines
Journal:  J Biol Chem       Date:  1996-03-22       Impact factor: 5.157

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  22 in total

1.  Optimizing high dimensional gene expression studies for immune response following smallpox vaccination using Taqman® low density immune arrays.

Authors:  Ann L Oberg; Neelam Dhiman; Diane E Grill; Jenna E Ryan; Richard B Kennedy; Gregory A Poland
Journal:  J Immunol Methods       Date:  2011-01-28       Impact factor: 2.303

2.  Enzymatic assays for assessing histone deubiquitylation activity.

Authors:  Robyn T Sussman; Xiao-Yong Zhang; Steven B McMahon
Journal:  Methods       Date:  2011-04-12       Impact factor: 3.608

Review 3.  Ubiquitin and proteasomes in transcription.

Authors:  Fuqiang Geng; Sabine Wenzel; William P Tansey
Journal:  Annu Rev Biochem       Date:  2012-03-08       Impact factor: 23.643

4.  The Rad23 ubiquitin receptor, the proteasome and functional specificity in transcriptional control.

Authors:  Staton L Wade; David T Auble
Journal:  Transcription       Date:  2010 Jul-Aug

Review 5.  Role of the ubiquitin-proteasome system in nervous system function and disease: using C. elegans as a dissecting tool.

Authors:  Márcio S Baptista; Carlos B Duarte; Patrícia Maciel
Journal:  Cell Mol Life Sci       Date:  2012-03-03       Impact factor: 9.261

Review 6.  Ubiquitin-like proteins and their roles in archaea.

Authors:  Julie A Maupin-Furlow
Journal:  Trends Microbiol       Date:  2012-11-08       Impact factor: 17.079

7.  Isopeptidases in anticancer therapy: looking for inhibitors.

Authors:  Andrea Sgorbissa; Harish Potu; Claudio Brancolini
Journal:  Am J Transl Res       Date:  2010-05-10       Impact factor: 4.060

8.  The phosphorylation of the androgen receptor by TFIIH directs the ubiquitin/proteasome process.

Authors:  Pierre Chymkowitch; Nicolas Le May; Pierre Charneau; Emmanuel Compe; Jean-Marc Egly
Journal:  EMBO J       Date:  2010-12-14       Impact factor: 11.598

Review 9.  Insights into the regulation of protein abundance from proteomic and transcriptomic analyses.

Authors:  Christine Vogel; Edward M Marcotte
Journal:  Nat Rev Genet       Date:  2012-03-13       Impact factor: 53.242

10.  Towards vast libraries of scaffold-diverse, conformationally constrained oligomers.

Authors:  Thomas Kodadek; Patrick J McEnaney
Journal:  Chem Commun (Camb)       Date:  2016-03-21       Impact factor: 6.222

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