Literature DB >> 19948718

Structural requirements of the photoreceptor phosphodiesterase gamma-subunit for inhibition of rod PDE6 holoenzyme and for its activation by transducin.

Xiu-Jun Zhang1, Nikolai P Skiba, Rick H Cote.   

Abstract

The central enzyme of the visual transduction cascade, cGMP phosphodiesterase (PDE6), is regulated by its gamma-subunit (Pgamma), whose inhibitory constraint is released upon binding of activated transducin. It is generally believed that the last four or five C-terminal amino acid residues of Pgamma are responsible for blocking catalysis. In this paper, we showed that the last 10 C-terminal residues (Pgamma78-87) are the minimum required to completely block catalysis. The kinetic mechanism of inhibition by the Pgamma C terminus depends on which substrate is undergoing catalysis. We also discovered a second mechanism of Pgamma inhibition that does not require this C-terminal region and that is capable of inhibiting up to 80% of the maximal cGMP hydrolytic rate. Furthermore, amino acids 63-70 and/or the intact alpha2 helix of Pgamma stabilize binding of C-terminal Pgamma peptides by 100-fold. When PDE6 catalytic subunits were reconstituted with portions of the Pgamma molecule and tested for activation by transducin, we found that the C-terminal region (Pgamma63-87) by itself could not be displaced but that transducin could relieve inhibition of certain Pgamma truncation mutants. Our results are consistent with two distinct mechanisms of Pgamma inhibition of PDE6. One involves direct interaction of the C-terminal residues with the catalytic site. A second regulatory mechanism may involve binding of other regions of Pgamma to the catalytic domain, thereby allosterically reducing the catalytic rate. Transducin activation of PDE6 appears to require interaction with both the C terminus and other regions of Pgamma to effectively relieve its inhibitory constraint.

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Year:  2009        PMID: 19948718      PMCID: PMC2836051          DOI: 10.1074/jbc.M109.057406

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  50 in total

1.  Functional regions of the inhibitory subunit of retinal rod cGMP phosphodiesterase identified by site-specific mutagenesis and fluorescence spectroscopy.

Authors:  R L Brown
Journal:  Biochemistry       Date:  1992-06-30       Impact factor: 3.162

2.  Missense mutation in the gene encoding the alpha subunit of rod transducin in the Nougaret form of congenital stationary night blindness.

Authors:  T P Dryja; L B Hahn; T Reboul; B Arnaud
Journal:  Nat Genet       Date:  1996-07       Impact factor: 38.330

3.  A site on transducin alpha-subunit of interaction with the polycationic region of cGMP phosphodiesterase inhibitory subunit.

Authors:  N O Artemyev; J S Mills; K R Thornburg; D R Knapp; K L Schey; H E Hamm
Journal:  J Biol Chem       Date:  1993-11-05       Impact factor: 5.157

4.  Mapping of effector binding sites of transducin alpha-subunit using G alpha t/G alpha i1 chimeras.

Authors:  N P Skiba; H Bae; H E Hamm
Journal:  J Biol Chem       Date:  1996-01-05       Impact factor: 5.157

5.  Site-directed mutagenesis of the cGMP phosphodiesterase gamma subunit from bovine rod outer segments: role of separate amino acid residues in the interaction with catalytic subunits and transducin alpha subunit.

Authors:  V M Lipkin; V A Bondarenko; V E Zagranichny; L N Dobrynina; K G Muradov
Journal:  Biochim Biophys Acta       Date:  1993-04-16

6.  An interface of interaction between photoreceptor cGMP phosphodiesterase catalytic subunits and inhibitory gamma subunits.

Authors:  M Natochin; N O Artemyev
Journal:  J Biol Chem       Date:  1996-08-16       Impact factor: 5.157

7.  Mechanism of photoreceptor cGMP phosphodiesterase inhibition by its gamma-subunits.

Authors:  N O Artemyev; M Natochin; M Busman; K L Schey; H E Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

8.  Sites of interaction between rod G-protein alpha-subunit and cGMP-phosphodiesterase gamma-subunit. Implications for the phosphodiesterase activation mechanism.

Authors:  N O Artemyev; H M Rarick; J S Mills; N P Skiba; H E Hamm
Journal:  J Biol Chem       Date:  1992-12-15       Impact factor: 5.157

9.  The carboxyl terminus of the gamma-subunit of rod cGMP phosphodiesterase contains distinct sites of interaction with the enzyme catalytic subunits and the alpha-subunit of transducin.

Authors:  N P Skiba; N O Artemyev; H E Hamm
Journal:  J Biol Chem       Date:  1995-06-02       Impact factor: 5.157

10.  Two-site high-affinity interaction between inhibitory and catalytic subunits of rod cyclic GMP phosphodiesterase.

Authors:  N O Artemyev; H E Hamm
Journal:  Biochem J       Date:  1992-04-01       Impact factor: 3.857

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  11 in total

1.  Characterization of conformational changes and protein-protein interactions of rod photoreceptor phosphodiesterase (PDE6).

Authors:  Suzanne L Matte; Thomas M Laue; Rick H Cote
Journal:  J Biol Chem       Date:  2012-04-18       Impact factor: 5.157

2.  Functional mapping of interacting regions of the photoreceptor phosphodiesterase (PDE6) γ-subunit with PDE6 catalytic dimer, transducin, and regulator of G-protein signaling9-1 (RGS9-1).

Authors:  Xiu-Jun Zhang; Xiong-Zhuo Gao; Wei Yao; Rick H Cote
Journal:  J Biol Chem       Date:  2012-06-04       Impact factor: 5.157

3.  N-terminal half of the cGMP phosphodiesterase gamma-subunit contributes to stabilization of the GTPase-accelerating protein complex.

Authors:  Lian-Wang Guo; Arnold E Ruoho
Journal:  J Biol Chem       Date:  2011-03-10       Impact factor: 5.157

4.  Domain organization and conformational plasticity of the G protein effector, PDE6.

Authors:  Zhixian Zhang; Feng He; Ryan Constantine; Matthew L Baker; Wolfgang Baehr; Michael F Schmid; Theodore G Wensel; Melina A Agosto
Journal:  J Biol Chem       Date:  2015-03-25       Impact factor: 5.157

5.  The N termini of the inhibitory γ-subunits of phosphodiesterase-6 (PDE6) from rod and cone photoreceptors differentially regulate transducin-mediated PDE6 activation.

Authors:  Xin Wang; David C Plachetzki; Rick H Cote
Journal:  J Biol Chem       Date:  2019-04-08       Impact factor: 5.157

6.  The molecular architecture of photoreceptor phosphodiesterase 6 (PDE6) with activated G protein elucidates the mechanism of visual excitation.

Authors:  Michael J Irwin; Richa Gupta; Xiong-Zhuo Gao; Karyn B Cahill; Feixia Chu; Rick H Cote
Journal:  J Biol Chem       Date:  2019-11-05       Impact factor: 5.157

7.  Determinants for phosphodiesterase 6 inhibition by its gamma-subunit.

Authors:  Zhongming Zhang; Nikolai O Artemyev
Journal:  Biochemistry       Date:  2010-05-11       Impact factor: 3.162

8.  Structural characterization of the rod cGMP phosphodiesterase 6.

Authors:  Anna Goc; Mohamed Chami; David T Lodowski; Patrick Bosshart; Vera Moiseenkova-Bell; Wolfgang Baehr; Andreas Engel; Krzysztof Palczewski
Journal:  J Mol Biol       Date:  2010-07-01       Impact factor: 5.469

Review 9.  Therapeutic targeting of 3',5'-cyclic nucleotide phosphodiesterases: inhibition and beyond.

Authors:  George S Baillie; Gonzalo S Tejeda; Michy P Kelly
Journal:  Nat Rev Drug Discov       Date:  2019-08-06       Impact factor: 84.694

Review 10.  Photoreceptor Phosphodiesterase (PDE6): Structure, Regulatory Mechanisms, and Implications for Treatment of Retinal Diseases.

Authors:  Rick H Cote; Richa Gupta; Michael J Irwin; Xin Wang
Journal:  Adv Exp Med Biol       Date:  2022       Impact factor: 3.650

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