Literature DB >> 19939922

Conformational changes in the hepatitis B virus core protein are consistent with a role for allostery in virus assembly.

Charles Packianathan1, Sarah P Katen, Charles E Dann, Adam Zlotnick.   

Abstract

In infected cells, virus components must be organized at the right place and time to ensure assembly of infectious virions. From a different perspective, assembly must be prevented until all components are available. Hypothetically, this can be achieved by allosterically controlling assembly. Consistent with this hypothesis, here we show that the structure of the hepatitis B virus (HBV) core protein dimer, which can spontaneously self-assemble, is incompatible with capsid assembly. Systematic differences between core protein dimer and capsid conformations demonstrate linkage between the intradimer interface and interdimer contact surface. These structures also provide explanations for the capsid-dimer selectivity of some antibodies and the activities of assembly effectors. Solution studies suggest that the assembly-inactive state is more accurately an ensemble of conformations. Simulations show that allostery supports controlled assembly and results in capsids that are resistant to dissociation. We propose that allostery, as demonstrated in HBV, is common to most self-assembling viruses.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19939922      PMCID: PMC2812345          DOI: 10.1128/JVI.02033-09

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  55 in total

Review 1.  Naturally occurring variants of hepatitis B virus.

Authors:  S Günther; L Fischer; I Pult; M Sterneck; H Will
Journal:  Adv Virus Res       Date:  1999       Impact factor: 9.937

2.  Viral self-assembly as a thermodynamic process.

Authors:  Robijn F Bruinsma; William M Gelbart; David Reguera; Joseph Rudnick; Roya Zandi
Journal:  Phys Rev Lett       Date:  2003-06-17       Impact factor: 9.161

3.  Distinguishing reversible from irreversible virus capsid assembly.

Authors:  Adam Zlotnick
Journal:  J Mol Biol       Date:  2006-11-11       Impact factor: 5.469

4.  Hepatitis core antigen produced in Escherichia coli: subunit composition, conformational analysis, and in vitro capsid assembly.

Authors:  P T Wingfield; S J Stahl; R W Williams; A C Steven
Journal:  Biochemistry       Date:  1995-04-18       Impact factor: 3.162

5.  Rous sarcoma virus Gag protein-oligonucleotide interaction suggests a critical role for protein dimer formation in assembly.

Authors:  Yu May Ma; Volker M Vogt
Journal:  J Virol       Date:  2002-06       Impact factor: 5.103

6.  Mechanism of capsid assembly for an icosahedral plant virus.

Authors:  A Zlotnick; R Aldrich; J M Johnson; P Ceres; M J Young
Journal:  Virology       Date:  2000-11-25       Impact factor: 3.616

7.  Interactions between HIV-1 Gag molecules in solution: an inositol phosphate-mediated switch.

Authors:  Siddhartha A K Datta; Zhuojun Zhao; Patrick K Clark; Sergey Tarasov; Jerry N Alexandratos; Stephen J Campbell; Mamuka Kvaratskhelia; Jacob Lebowitz; Alan Rein
Journal:  J Mol Biol       Date:  2006-10-26       Impact factor: 5.469

8.  Hepatitis B virus capsid assembly is enhanced by naturally occurring mutation F97L.

Authors:  Pablo Ceres; Stephen J Stray; Adam Zlotnick
Journal:  J Virol       Date:  2004-09       Impact factor: 5.103

9.  An in vitro fluorescence screen to identify antivirals that disrupt hepatitis B virus capsid assembly.

Authors:  Stephen J Stray; Jennifer M Johnson; Benjamin G Kopek; Adam Zlotnick
Journal:  Nat Biotechnol       Date:  2006-02-12       Impact factor: 54.908

10.  Cys residues of the hepatitis B virus capsid protein are not essential for the assembly of viral core particles but can influence their stability.

Authors:  S Zhou; D N Standring
Journal:  J Virol       Date:  1992-09       Impact factor: 5.103

View more
  65 in total

1.  Exploring the paths of (virus) assembly.

Authors:  Paul Moisant; Henry Neeman; Adam Zlotnick
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

2.  Tabulation as a high-resolution alternative to coarse-graining protein interactions: Initial application to virus capsid subunits.

Authors:  Justin Spiriti; Daniel M Zuckerman
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

3.  Thermodynamic origins of protein folding, allostery, and capsid formation in the human hepatitis B virus core protein.

Authors:  Crispin G Alexander; Maike C Jürgens; Dale A Shepherd; Stefan M V Freund; Alison E Ashcroft; Neil Ferguson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-03       Impact factor: 11.205

4.  Assembly Reactions of Hepatitis B Capsid Protein into Capsid Nanoparticles Follow a Narrow Path through a Complex Reaction Landscape.

Authors:  Roi Asor; Lisa Selzer; Christopher John Schlicksup; Zhongchao Zhao; Adam Zlotnick; Uri Raviv
Journal:  ACS Nano       Date:  2019-06-25       Impact factor: 15.881

5.  The interface between hepatitis B virus capsid proteins affects self-assembly, pregenomic RNA packaging, and reverse transcription.

Authors:  Zhenning Tan; Karolyn Pionek; Nuruddin Unchwaniwala; Megan L Maguire; Daniel D Loeb; Adam Zlotnick
Journal:  J Virol       Date:  2015-01-07       Impact factor: 5.103

6.  Subunit exchange rates in Hepatitis B virus capsids are geometry- and temperature-dependent.

Authors:  Charlotte Uetrecht; Norman R Watts; Stephen J Stahl; Paul T Wingfield; Alasdair C Steven; Albert J R Heck
Journal:  Phys Chem Chem Phys       Date:  2010-07-30       Impact factor: 3.676

7.  Dynamics of Hepatitis B Virus Capsid Protein Dimer Regulate Assembly through an Allosteric Network.

Authors:  Angela Patterson; Zhongchao Zhao; Elizabeth Waymire; Adam Zlotnick; Brian Bothner
Journal:  ACS Chem Biol       Date:  2020-07-28       Impact factor: 5.100

8.  Scaffold properties are a key determinant of the size and shape of self-assembled virus-derived particles.

Authors:  Stanislav Kler; Joseph Che-Yen Wang; Mary Dhason; Ariella Oppenheim; Adam Zlotnick
Journal:  ACS Chem Biol       Date:  2013-10-23       Impact factor: 5.100

Review 9.  Virus assembly and maturation: auto-regulation through allosteric molecular switches.

Authors:  Tatiana Domitrovic; Navid Movahed; Brian Bothner; Tsutomu Matsui; Qiu Wang; Peter C Doerschuk; John E Johnson
Journal:  J Mol Biol       Date:  2013-02-26       Impact factor: 5.469

10.  Specificity of an anti-capsid antibody associated with Hepatitis B Virus-related acute liver failure.

Authors:  Weimin Wu; Zhaochun Chen; Naiqian Cheng; Norman R Watts; Stephen J Stahl; Patrizia Farci; Robert H Purcell; Paul T Wingfield; Alasdair C Steven
Journal:  J Struct Biol       Date:  2012-10-16       Impact factor: 2.867

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.