Literature DB >> 32662972

Dynamics of Hepatitis B Virus Capsid Protein Dimer Regulate Assembly through an Allosteric Network.

Angela Patterson1, Zhongchao Zhao2, Elizabeth Waymire1, Adam Zlotnick2, Brian Bothner1.   

Abstract

While there is an effective vaccine for Human Hepatitis B Virus (HBV), 257 million people have chronic infections for which there is no cure. The assembly process for the viral capsid is a potential therapeutic target. In order to understand the capsid assembly process, we investigated the dimeric building blocks of the capsid. To understand what blocks assembly, we took advantage of an assembly incompetent mutant dimer, Cp149-Y132A, located in the interdimer interface. This mutation leads to changes in protein dynamics throughout the structure of the dimer as measured by hydrogen-deuterium exchange mass spectrometry (HDX-MS). To further understand how the HBV capsid assembles, the homologue woodchuck HBV (WHV) capsid protein dimer (Cp) was used. WHV is more stable than HBV in HDX-MS and native mass spectrometry experiments. Because the WHV Cp assembles more rapidly into viral capsids than HBV, it was suspected that an increase in stability of the intradimer interface and/or in the contact region leads to increased assembly rates. The differences in dynamics when comparing HBV and human Cp149-Y132A as well as the differences in dynamics when comparing the HBV and WHV Cps allowed us to map an allosteric network within the HBV dimer. Through a careful comparison of structure, stability, and dynamics using four different capsid protein dimers, we conclude that protein subunit dynamics regulate HBV capsid assembly.

Entities:  

Year:  2020        PMID: 32662972      PMCID: PMC8011827          DOI: 10.1021/acschembio.0c00481

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  48 in total

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Authors:  Frank H Niesen; Helena Berglund; Masoud Vedadi
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 2.  The woodchuck model of hepatitis B virus infection.

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Journal:  ILAR J       Date:  2001

Review 3.  Hydrogen exchange mass spectrometry for studying protein structure and dynamics.

Authors:  Lars Konermann; Jingxi Pan; Yu-Hong Liu
Journal:  Chem Soc Rev       Date:  2010-12-21       Impact factor: 54.564

4.  Folding and assembly of hepatitis B virus core protein: a new model proposal.

Authors:  R Bringas
Journal:  J Struct Biol       Date:  1997-04       Impact factor: 2.867

5.  Hepatitis B Virus Core Protein Phosphorylation Sites Affect Capsid Stability and Transient Exposure of the C-terminal Domain.

Authors:  Lisa Selzer; Ravi Kant; Joseph C-Y Wang; Brian Bothner; Adam Zlotnick
Journal:  J Biol Chem       Date:  2015-09-24       Impact factor: 5.157

6.  Conformational equilibria and rates of localized motion within hepatitis B virus capsids.

Authors:  Jonathan K Hilmer; Adam Zlotnick; Brian Bothner
Journal:  J Mol Biol       Date:  2007-10-22       Impact factor: 5.469

7.  A mutant hepatitis B virus core protein mimics inhibitors of icosahedral capsid self-assembly.

Authors:  Christina R Bourne; Sarah P Katen; Matthew R Fulz; Charles Packianathan; Adam Zlotnick
Journal:  Biochemistry       Date:  2009-03-03       Impact factor: 3.162

8.  Phosphorylation-dependent binding of hepatitis B virus core particles to the nuclear pore complex.

Authors:  M Kann; B Sodeik; A Vlachou; W H Gerlich; A Helenius
Journal:  J Cell Biol       Date:  1999-04-05       Impact factor: 10.539

9.  Importin β Can Bind Hepatitis B Virus Core Protein and Empty Core-Like Particles and Induce Structural Changes.

Authors:  Chao Chen; Joseph Che-Yen Wang; Elizabeth E Pierson; David Z Keifer; Mildred Delaleau; Lara Gallucci; Christian Cazenave; Michael Kann; Martin F Jarrold; Adam Zlotnick
Journal:  PLoS Pathog       Date:  2016-08-12       Impact factor: 6.823

10.  Rapidly Forming Early Intermediate Structures Dictate the Pathway of Capsid Assembly.

Authors:  Roi Asor; Christopher John Schlicksup; Zhongchao Zhao; Adam Zlotnick; Uri Raviv
Journal:  J Am Chem Soc       Date:  2020-04-20       Impact factor: 15.419

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  3 in total

1.  Hysteresis in Hepatitis B Virus (HBV) Requires Assembly of Near-Perfect Capsids.

Authors:  Caleb A Starr; Lauren F Barnes; Martin F Jarrold; Adam Zlotnick
Journal:  Biochemistry       Date:  2022-03-08       Impact factor: 3.321

Review 2.  Mass Spectrometry-Based Structural Virology.

Authors:  Tobias P Wörner; Tatiana M Shamorkina; Joost Snijder; Albert J R Heck
Journal:  Anal Chem       Date:  2020-12-04       Impact factor: 6.986

3.  Rtt105 regulates RPA function by configurationally stapling the flexible domains.

Authors:  Jaigeeth Deveryshetty; Rahul Chadda; Jenna R Mattice; Sahiti Kuppa; Nilisha Pokhrel; Vikas Kaushik; Angela Patterson; Nalini Dhingra; Sushil Pangeni; Marisa K Sadauskas; Sajad Shiekh; Hamza Balci; Taekjip Ha; Xiaolan Zhao; Brian Bothner; Edwin Antony
Journal:  Nat Commun       Date:  2022-09-02       Impact factor: 17.694

  3 in total

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