Literature DB >> 19933873

Proteasomal degradation of Rpn4 in Saccharomyces cerevisiae is critical for cell viability under stressed conditions.

Xiaogang Wang1, Haiming Xu, Seung-Wook Ha, Donghong Ju, Youming Xie.   

Abstract

The proteasome homeostasis in Saccharomyces cerevisiae is regulated by a negative feedback loop in which the transcription factor Rpn4 induces the proteasome genes and is rapidly degraded by the assembled proteasome. In addition to the proteasome genes, Rpn4 regulates numerous other genes involved in a wide range of cellular pathways. Therefore, the Rpn4-proteasome negative feedback circuit not only controls proteasome abundance, but also gauges the expression of other Rpn4 target genes. Our previous work has shown that Rpn4-induced gene expression is critical for cell viability under stressed conditions. Here we investigate whether proteasomal degradation of Rpn4 is also important for cell survival in response to stress. To this end, we generate a stabilized Rpn4 mutant (Rpn4*) that retains its transcription activity. We find that expression of Rpn4* severely reduces cell viability in response to various genotoxic and proteotoxic agents. This detrimental effect can be eliminated by a point mutation that abolishes the transcription activity of Rpn4*, suggesting that overexpression of some Rpn4 target genes weakens the cell's ability to cope with stress. Moreover, we demonstrate that inhibition of Rpn4 degradation causes synthetic growth defects when combined with proteasome impairment resulting from mutation of a proteasome gene or accumulation of misfolded endoplasmic reticulum membrane proteins. Rpn4 thus represents an important stress-responsive mediator whose degradation as well as availability are critical for cell survival under stressed conditions.

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Year:  2009        PMID: 19933873      PMCID: PMC2828715          DOI: 10.1534/genetics.109.112227

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  35 in total

1.  RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: a negative feedback circuit.

Authors:  Y Xie; A Varshavsky
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

2.  Inhibition of proteasome activity induces concerted expression of proteasome genes and de novo formation of Mammalian proteasomes.

Authors:  Silke Meiners; Dirk Heyken; Andrea Weller; Antje Ludwig; Karl Stangl; Peter-M Kloetzel; Elke Krüger
Journal:  J Biol Chem       Date:  2003-04-03       Impact factor: 5.157

3.  Control of 26S proteasome expression by transcription factors regulating multidrug resistance in Saccharomyces cerevisiae.

Authors:  Grzegorz Owsianik; Lisabetta Balzi l; Michel Ghislain
Journal:  Mol Microbiol       Date:  2002-03       Impact factor: 3.501

4.  Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p.

Authors:  A P Gasch; M Huang; S Metzner; D Botstein; S J Elledge; P O Brown
Journal:  Mol Biol Cell       Date:  2001-10       Impact factor: 4.138

5.  Analysis of Drosophila 26 S proteasome using RNA interference.

Authors:  Cezary Wójcik; George N DeMartino
Journal:  J Biol Chem       Date:  2001-12-05       Impact factor: 5.157

6.  Analysis of quality control substrates in distinct cellular compartments reveals a unique role for Rpn4p in tolerating misfolded membrane proteins.

Authors:  Meredith Boyle Metzger; Susan Michaelis
Journal:  Mol Biol Cell       Date:  2008-12-10       Impact factor: 4.138

7.  Use of RNA interference and complementation to study the function of the Drosophila and human 26S proteasome subunit S13.

Authors:  Josefin Lundgren; Patrick Masson; Claudio A Realini; Patrick Young
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

8.  Regulatory mechanisms controlling biogenesis of ubiquitin and the proteasome.

Authors:  Markus K London; Birgit I Keck; Paula C Ramos; R Jürgen Dohmen
Journal:  FEBS Lett       Date:  2004-06-04       Impact factor: 4.124

9.  Proteasomal degradation of RPN4 via two distinct mechanisms, ubiquitin-dependent and -independent.

Authors:  Donghong Ju; Youming Xie
Journal:  J Biol Chem       Date:  2004-04-16       Impact factor: 5.157

10.  The unfolded protein response regulates multiple aspects of secretory and membrane protein biogenesis and endoplasmic reticulum quality control.

Authors:  D T Ng; E D Spear; P Walter
Journal:  J Cell Biol       Date:  2000-07-10       Impact factor: 10.539

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  24 in total

1.  Cuz1/Ynl155w, a zinc-dependent ubiquitin-binding protein, protects cells from metalloid-induced proteotoxicity.

Authors:  John Hanna; David Waterman; Marta Isasa; Suzanne Elsasser; Yuan Shi; Steven Gygi; Daniel Finley
Journal:  J Biol Chem       Date:  2013-12-02       Impact factor: 5.157

2.  Importance of Proteasome Gene Expression during Model Dough Fermentation after Preservation of Baker's Yeast Cells by Freezing.

Authors:  Daisuke Watanabe; Hiroshi Sekiguchi; Yukiko Sugimoto; Atsushi Nagasawa; Naotaka Kida; Hiroshi Takagi
Journal:  Appl Environ Microbiol       Date:  2018-05-31       Impact factor: 4.792

3.  Induction of proteotoxic stress by the mycotoxin patulin.

Authors:  Angel Guerra-Moreno; John Hanna
Journal:  Toxicol Lett       Date:  2017-05-18       Impact factor: 4.372

4.  Nuclear import factor Srp1 and its associated protein Sts1 couple ribosome-bound nascent polypeptides to proteasomes for cotranslational degradation.

Authors:  Seung-Wook Ha; Donghong Ju; Youming Xie
Journal:  J Biol Chem       Date:  2013-12-12       Impact factor: 5.157

Review 5.  The ubiquitin-proteasome system of Saccharomyces cerevisiae.

Authors:  Daniel Finley; Helle D Ulrich; Thomas Sommer; Peter Kaiser
Journal:  Genetics       Date:  2012-10       Impact factor: 4.562

6.  ChiNet uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion.

Authors:  Yang Zhang; Z Lewis Liu; Mingzhou Song
Journal:  Nucleic Acids Res       Date:  2015-04-20       Impact factor: 16.971

7.  Msn2 coordinates a stoichiometric gene expression program.

Authors:  Jacob Stewart-Ornstein; Christopher Nelson; Joe DeRisi; Jonathan S Weissman; Hana El-Samad
Journal:  Curr Biol       Date:  2013-11-07       Impact factor: 10.834

8.  Inhibition of proteasomal degradation of rpn4 impairs nonhomologous end-joining repair of DNA double-strand breaks.

Authors:  Donghong Ju; Xiaogang Wang; Seung-Wook Ha; Jiejun Fu; Youming Xie
Journal:  PLoS One       Date:  2010-04-01       Impact factor: 3.240

Review 9.  Stress modulation as a means to improve yeasts for lignocellulose bioconversion.

Authors:  B A Brandt; T Jansen; H Volschenk; J F Görgens; W H Van Zyl; R Den Haan
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-07       Impact factor: 4.813

10.  Transcriptome sequencing (RNA-seq) analysis of the effects of metal nanoparticle exposure on the transcriptome of Chlamydomonas reinhardtii.

Authors:  Dana F Simon; Rute F Domingos; Charles Hauser; Colin M Hutchins; William Zerges; Kevin J Wilkinson
Journal:  Appl Environ Microbiol       Date:  2013-05-31       Impact factor: 4.792

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