Literature DB >> 19933100

Structural mechanism of abscisic acid binding and signaling by dimeric PYR1.

Noriyuki Nishimura1, Kenichi Hitomi, Andrew S Arvai, Robert P Rambo, Chiharu Hitomi, Sean R Cutler, Julian I Schroeder, Elizabeth D Getzoff.   

Abstract

The phytohormone abscisic acid (ABA) acts in seed dormancy, plant development, drought tolerance, and adaptive responses to environmental stresses. Structural mechanisms mediating ABA receptor recognition and signaling remain unknown but are essential for understanding and manipulating abiotic stress resistance. Here, we report structures of pyrabactin resistance 1 (PYR1), a prototypical PYR/PYR1-like (PYL)/regulatory component of ABA receptor (RCAR) protein that functions in early ABA signaling. The crystallographic structure reveals an alpha/beta helix-grip fold and homodimeric assembly, verified in vivo by coimmunoprecipitation. ABA binding within a large internal cavity switches structural motifs distinguishing ABA-free "open-lid" from ABA-bound "closed-lid" conformations. Small-angle x-ray scattering suggests that ABA signals by converting PYR1 to a more compact, symmetric closed-lid dimer. Site-directed PYR1 mutants designed to disrupt hormone binding lose ABA-triggered interactions with type 2C protein phosphatase partners in planta.

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Year:  2009        PMID: 19933100      PMCID: PMC2835493          DOI: 10.1126/science.1181829

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  32 in total

Review 1.  Abscisic acid signaling in seeds and seedlings.

Authors:  Ruth R Finkelstein; Srinivas S L Gampala; Christopher D Rock
Journal:  Plant Cell       Date:  2002       Impact factor: 11.277

2.  Structure and lipid transport mechanism of a StAR-related domain.

Authors:  Y Tsujishita; J H Hurley
Journal:  Nat Struct Biol       Date:  2000-05

3.  The ABI1 and ABI2 protein phosphatases 2C act in a negative feedback regulatory loop of the abscisic acid signalling pathway.

Authors:  S Merlot; F Gosti; D Guerrier; A Vavasseur; J Giraudat
Journal:  Plant J       Date:  2001-02       Impact factor: 6.417

4.  ABA-hypersensitive germination3 encodes a protein phosphatase 2C (AtPP2CA) that strongly regulates abscisic acid signaling during germination among Arabidopsis protein phosphatase 2Cs.

Authors:  Tomo Yoshida; Noriyuki Nishimura; Nobutaka Kitahata; Takashi Kuromori; Takuya Ito; Tadao Asami; Kazuo Shinozaki; Takashi Hirayama
Journal:  Plant Physiol       Date:  2005-12-09       Impact factor: 8.340

5.  Arabidopsis abi1-1 and abi2-1 phosphatase mutations reduce abscisic acid-induced cytoplasmic calcium rises in guard cells.

Authors:  G J Allen; K Kuchitsu; S P Chu; Y Murata; J I Schroeder
Journal:  Plant Cell       Date:  1999-09       Impact factor: 11.277

6.  Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins.

Authors:  Sang-Youl Park; Pauline Fung; Noriyuki Nishimura; Davin R Jensen; Hiroaki Fujii; Yang Zhao; Shelley Lumba; Julia Santiago; Americo Rodrigues; Tsz-Fung F Chow; Simon E Alfred; Dario Bonetta; Ruth Finkelstein; Nicholas J Provart; Darrell Desveaux; Pedro L Rodriguez; Peter McCourt; Jian-Kang Zhu; Julian I Schroeder; Brian F Volkman; Sean R Cutler
Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

7.  Regulators of PP2C phosphatase activity function as abscisic acid sensors.

Authors:  Yue Ma; Izabela Szostkiewicz; Arthur Korte; Danièle Moes; Yi Yang; Alexander Christmann; Erwin Grill
Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

8.  Triple loss of function of protein phosphatases type 2C leads to partial constitutive response to endogenous abscisic acid.

Authors:  Silvia Rubio; Americo Rodrigues; Angela Saez; Marie B Dizon; Alexander Galle; Tae-Houn Kim; Julia Santiago; Jaume Flexas; Julian I Schroeder; Pedro L Rodriguez
Journal:  Plant Physiol       Date:  2009-05-20       Impact factor: 8.340

9.  Arabidopsis mutant deficient in 3 abscisic acid-activated protein kinases reveals critical roles in growth, reproduction, and stress.

Authors:  Hiroaki Fujii; Jian-Kang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-06       Impact factor: 11.205

10.  ABA-Hypersensitive Germination1 encodes a protein phosphatase 2C, an essential component of abscisic acid signaling in Arabidopsis seed.

Authors:  Noriyuki Nishimura; Tomo Yoshida; Nobutaka Kitahata; Tadao Asami; Kazuo Shinozaki; Takashi Hirayama
Journal:  Plant J       Date:  2007-04-25       Impact factor: 6.417

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  198 in total

Review 1.  The ABA signal transduction mechanism in commercial crops: learning from Arabidopsis.

Authors:  Giora Ben-Ari
Journal:  Plant Cell Rep       Date:  2012-06-04       Impact factor: 4.570

2.  Structural basis for basal activity and autoactivation of abscisic acid (ABA) signaling SnRK2 kinases.

Authors:  Ley-Moy Ng; Fen-Fen Soon; X Edward Zhou; Graham M West; Amanda Kovach; Kelly M Suino-Powell; Michael J Chalmers; Jun Li; Eu-Leong Yong; Jian-Kang Zhu; Patrick R Griffin; Karsten Melcher; H Eric Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

3.  Hormonal changes during flower development in floral tissues of Lilium.

Authors:  L Arrom; S Munné-Bosch
Journal:  Planta       Date:  2012-02-25       Impact factor: 4.116

4.  New technologies for 21st century plant science.

Authors:  David W Ehrhardt; Wolf B Frommer
Journal:  Plant Cell       Date:  2012-02-24       Impact factor: 11.277

5.  Connections between sphingosine kinase and phospholipase D in the abscisic acid signaling pathway in Arabidopsis.

Authors:  Liang Guo; Girish Mishra; Jonathan E Markham; Maoyin Li; Amanda Tawfall; Ruth Welti; Xuemin Wang
Journal:  J Biol Chem       Date:  2012-01-24       Impact factor: 5.157

6.  Small angle X-ray scattering and cross-linking for data assisted protein structure prediction in CASP 12 with prospects for improved accuracy.

Authors:  Tadeusz L Ogorzalek; Greg L Hura; Adam Belsom; Kathryn H Burnett; Andriy Kryshtafovych; John A Tainer; Juri Rappsilber; Susan E Tsutakawa; Krzysztof Fidelis
Journal:  Proteins       Date:  2018-02-07

7.  Photoaffinity labeling of the sigma-1 receptor with N-[3-(4-nitrophenyl)propyl]-N-dodecylamine: evidence of receptor dimers.

Authors:  Uyen B Chu; Subramaniam Ramachandran; Abdol R Hajipour; Arnold E Ruoho
Journal:  Biochemistry       Date:  2013-01-28       Impact factor: 3.162

8.  FERONIA receptor kinase pathway suppresses abscisic acid signaling in Arabidopsis by activating ABI2 phosphatase.

Authors:  Feng Yu; Lichao Qian; Candida Nibau; Qiaohong Duan; Daniel Kita; Kathryn Levasseur; Xiaoqian Li; Changqing Lu; Hui Li; Congcong Hou; Legong Li; Bob B Buchanan; Liangbi Chen; Alice Y Cheung; Dongping Li; Sheng Luan
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-20       Impact factor: 11.205

9.  Endogenous Bioactive Jasmonate Is Composed of a Set of (+)-7-iso-JA-Amino Acid Conjugates.

Authors:  Jianbin Yan; Suhua Li; Min Gu; Ruifeng Yao; Yuwen Li; Juan Chen; Mai Yang; Jianhua Tong; Langtao Xiao; Fajun Nan; Daoxin Xie
Journal:  Plant Physiol       Date:  2016-10-17       Impact factor: 8.340

10.  Reconstitution of Abscisic Acid Signaling from the Receptor to DNA via bHLH Transcription Factors.

Authors:  Yohei Takahashi; Yuta Ebisu; Ken-Ichiro Shimazaki
Journal:  Plant Physiol       Date:  2017-04-24       Impact factor: 8.340

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