Literature DB >> 19925799

Eukaryotic initiator tRNA: finely tuned and ready for action.

Sarah E Kolitz1, Jon R Lorsch.   

Abstract

The initiator tRNA must serve functions distinct from those of other tRNAs, evading binding to elongation factors and instead binding directly to the ribosomal P site with the aid of initiation factors. It plays a key role in decoding the start codon, setting the frame for translation of the mRNA. Sequence elements and modifications of the initiator tRNA distinguish it from the elongator methionyl tRNA and help it to perform its varied tasks. These identity elements appear to finely tune the structure of the initiator tRNA, and growing evidence suggests that the body of the tRNA is involved in transmitting the signal that the start codon has been found to the rest of the pre-initiation complex.

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Year:  2010        PMID: 19925799      PMCID: PMC2795131          DOI: 10.1016/j.febslet.2009.11.047

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  82 in total

1.  Recognition of tRNAs by Methionyl-tRNA transformylase from mammalian mitochondria.

Authors:  N Takeuchi; L Vial; M Panvert; E Schmitt; K Watanabe; Y Mechulam; S Blanquet
Journal:  J Biol Chem       Date:  2001-03-23       Impact factor: 5.157

2.  Altered discrimination of start codons and initiator tRNAs by mutant initiation factor 3.

Authors:  M O'Connor; S T Gregory; U L Rajbhandary; A E Dahlberg
Journal:  RNA       Date:  2001-07       Impact factor: 4.942

3.  Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA.

Authors:  Laura Lancaster; Harry F Noller
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

4.  Communication between eukaryotic translation initiation factors 5 and 1A within the ribosomal pre-initiation complex plays a role in start site selection.

Authors:  David Maag; Mikkel A Algire; Jon R Lorsch
Journal:  J Mol Biol       Date:  2005-12-15       Impact factor: 5.469

5.  The fidelity of translation initiation: reciprocal activities of eIF1, IF3 and YciH.

Authors:  Ivan B Lomakin; Nikolay E Shirokikh; Marat M Yusupov; Christopher U T Hellen; Tatyana V Pestova
Journal:  EMBO J       Date:  2005-12-15       Impact factor: 11.598

6.  Structural basis for messenger RNA movement on the ribosome.

Authors:  Gulnara Yusupova; Lasse Jenner; Bernard Rees; Dino Moras; Marat Yusupov
Journal:  Nature       Date:  2006-10-18       Impact factor: 49.962

7.  Characterization of 16S rRNA mutations that decrease the fidelity of translation initiation.

Authors:  Daoming Qin; Nimo M Abdi; Kurt Fredrick
Journal:  RNA       Date:  2007-10-17       Impact factor: 4.942

8.  Role of 16S ribosomal RNA methylations in translation initiation in Escherichia coli.

Authors:  Gautam Das; Dinesh Kumar Thotala; Suman Kapoor; Sheelarani Karunanithi; Suman S Thakur; N Sadananda Singh; Umesh Varshney
Journal:  EMBO J       Date:  2008-02-21       Impact factor: 11.598

9.  The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae.

Authors:  J Anderson; L Phan; A G Hinnebusch
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

10.  N- and C-terminal residues of eIF1A have opposing effects on the fidelity of start codon selection.

Authors:  Christie A Fekete; Sarah F Mitchell; Vera A Cherkasova; Drew Applefield; Mikkel A Algire; David Maag; Adesh K Saini; Jon R Lorsch; Alan G Hinnebusch
Journal:  EMBO J       Date:  2007-03-01       Impact factor: 11.598

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  28 in total

1.  Kinetics of tRNA folding monitored by aminoacylation.

Authors:  Hari Bhaskaran; Annia Rodriguez-Hernandez; John J Perona
Journal:  RNA       Date:  2012-01-27       Impact factor: 4.942

Review 2.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

Review 3.  Molecular view of 43 S complex formation and start site selection in eukaryotic translation initiation.

Authors:  Jon R Lorsch; Thomas E Dever
Journal:  J Biol Chem       Date:  2010-05-05       Impact factor: 5.157

4.  Stable tRNA-based phylogenies using only 76 nucleotides.

Authors:  Jeremy Widmann; J Kirk Harris; Catherine Lozupone; Alexey Wolfson; Rob Knight
Journal:  RNA       Date:  2010-06-17       Impact factor: 4.942

5.  RAPID COMMUNICATION: Residual feed intake in beef cattle is associated with differences in protein turnover and nutrient transporters in ruminal epithelium.

Authors:  Ahmed A Elolimy; Emad Abdel-Hamied; Liangyu Hu; Joshua C McCann; Daniel W Shike; Juan J Loor
Journal:  J Anim Sci       Date:  2019-04-29       Impact factor: 3.159

6.  Mechanism of cytoplasmic mRNA translation.

Authors:  Karen S Browning; Julia Bailey-Serres
Journal:  Arabidopsis Book       Date:  2015-04-24

Review 7.  Emergence and evolution.

Authors:  Tammy J Bullwinkle; Michael Ibba
Journal:  Top Curr Chem       Date:  2014

8.  SOX4-mediated repression of specific tRNAs inhibits proliferation of human glioblastoma cells.

Authors:  Jianjing Yang; Derek K Smith; Haoqi Ni; Ke Wu; Dongdong Huang; Sishi Pan; Adwait A Sathe; Yu Tang; Meng-Lu Liu; Chao Xing; Chun-Li Zhang; Qichuan Zhuge
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-02       Impact factor: 11.205

9.  GCN2- and eIF2α-phosphorylation-independent, but ATF4-dependent, induction of CARE-containing genes in methionine-deficient cells.

Authors:  Kevin M Mazor; Martha H Stipanuk
Journal:  Amino Acids       Date:  2016-09-10       Impact factor: 3.520

10.  The kinetic mechanism of bacterial ribosome recycling.

Authors:  Yuanwei Chen; Akira Kaji; Hideko Kaji; Barry S Cooperman
Journal:  Nucleic Acids Res       Date:  2017-09-29       Impact factor: 16.971

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