Literature DB >> 19925456

Queuosine modification of tRNA: its divergent role in cellular machinery.

Manjula Vinayak1, Chandramani Pathak.   

Abstract

tRNAs possess a high content of modified nucleosides, which display an incredible structural variety. These modified nucleosides are conserved in their sequence and have important roles in tRNA functions. Most often, hypermodified nucleosides are found in the wobble position of tRNAs, which play a direct role in maintaining translational efficiency and fidelity, codon recognition, etc. One of such hypermodified base is queuine, which is a base analogue of guanine, found in the first anticodon position of specific tRNAs (tyrosine, histidine, aspartate and asparagine tRNAs). These tRNAs of the 'Q-family' originally contain guanine in the first position of anticodon, which is post-transcriptionally modified with queuine by an irreversible insertion during maturation. Queuine is ubiquitously present throughout the living system from prokaryotes to eukaryotes, including plants. Prokaryotes can synthesize queuine de novo by a complex biosynthetic pathway, whereas eukaryotes are unable to synthesize either the precursor or queuine. They utilize salvage system and acquire queuine as a nutrient factor from their diet or from intestinal microflora. The tRNAs of the Q-family are completely modified in terminally differentiated somatic cells. However, hypomodification of Q-tRNA (queuosine-modified tRNA) is closely associated with cell proliferation and malignancy. The precise mechanisms of queuine- and Q-tRNA-mediated action are still a mystery. Direct or indirect evidence suggests that queuine or Q-tRNA participates in many cellular functions, such as inhibition of cell proliferation, control of aerobic and anaerobic metabolism, bacterial virulence, etc. The role of Q-tRNA modification in cellular machinery and the signalling pathways involved therein is the focus of this review.

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Year:  2009        PMID: 19925456     DOI: 10.1042/BSR20090057

Source DB:  PubMed          Journal:  Biosci Rep        ISSN: 0144-8463            Impact factor:   3.840


  45 in total

1.  Genome annotation and intraviral interactome for the Streptococcus pneumoniae virulent phage Dp-1.

Authors:  Mourad Sabri; Roman Häuser; Marc Ouellette; Jing Liu; Mohammed Dehbi; Greg Moeck; Ernesto García; Björn Titz; Peter Uetz; Sylvain Moineau
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

2.  The Effects of Ultraviolet Radiation on Nucleoside Modifications in RNA.

Authors:  Congliang Sun; Manasses Jora; Beulah Solivio; Patrick A Limbach; Balasubrahmanyam Addepalli
Journal:  ACS Chem Biol       Date:  2018-02-05       Impact factor: 5.100

3.  Cellular dynamics of RNA modification.

Authors:  Chengqi Yi; Tao Pan
Journal:  Acc Chem Res       Date:  2011-05-26       Impact factor: 22.384

Review 4.  Determinants of tRNA editing and modification: avoiding conundrums, affecting function.

Authors:  Zdeněk Paris; Ian M C Fleming; Juan D Alfonzo
Journal:  Semin Cell Dev Biol       Date:  2011-10-19       Impact factor: 7.727

5.  Multi-metal Restriction by Calprotectin Impacts De Novo Flavin Biosynthesis in Acinetobacter baumannii.

Authors:  Jiefei Wang; Zachery R Lonergan; Giovanni Gonzalez-Gutierrez; Brittany L Nairn; Christina N Maxwell; Yixiang Zhang; Claudia Andreini; Jonathan A Karty; Walter J Chazin; Jonathan C Trinidad; Eric P Skaar; David P Giedroc
Journal:  Cell Chem Biol       Date:  2019-03-21       Impact factor: 8.116

6.  Evidence of a sequestered imine intermediate during reduction of nitrile to amine by the nitrile reductase QueF from Escherichia coli.

Authors:  Jihye Jung; Bernd Nidetzky
Journal:  J Biol Chem       Date:  2018-01-16       Impact factor: 5.157

Review 7.  Structure and mechanism of purine-binding riboswitches.

Authors:  Robert T Batey
Journal:  Q Rev Biophys       Date:  2012-07-31       Impact factor: 5.318

Review 8.  Transfer RNA modifications: nature's combinatorial chemistry playground.

Authors:  Jane E Jackman; Juan D Alfonzo
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-11-08       Impact factor: 9.957

9.  Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens.

Authors:  Yifeng Yuan; Rémi Zallot; Tyler L Grove; Daniel J Payan; Isabelle Martin-Verstraete; Sara Šepić; Seetharamsingh Balamkundu; Ramesh Neelakandan; Vinod K Gadi; Chuan-Fa Liu; Manal A Swairjo; Peter C Dedon; Steven C Almo; John A Gerlt; Valérie de Crécy-Lagard
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-03       Impact factor: 12.779

10.  Queuosine biosynthesis is required for sinorhizobium meliloti-induced cytoskeletal modifications on HeLa Cells and symbiosis with Medicago truncatula.

Authors:  Marta Marchetti; Delphine Capela; Renaud Poincloux; Nacer Benmeradi; Marie-Christine Auriac; Aurélie Le Ru; Isabelle Maridonneau-Parini; Jacques Batut; Catherine Masson-Boivin
Journal:  PLoS One       Date:  2013-02-08       Impact factor: 3.240

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