Literature DB >> 19924903

Application of the second rule of transient-state kinetic isotope effects to an enzymatic mechanism.

Harvey F Fisher1, Steven J Maniscalco, Jon Tally, Kayann Tabanor.   

Abstract

The transient-state kinetic approach reveals the formation and subsequent interconversions of intermediates in real time. Its potential for the mechanistic resolution of enzymatic and other complex chemical mechanisms has been severely limited however by the lack of a rigorous and applicable theoretical basis in contrast to that of the less direct but soundly based algebraic algorithms of the steady-state approach. Having recently established three rigorously derived fundamental "rules" of transient-state kinetics applicable to realistic multiple step reactions, we present here the successful application of the very counterintuitive "second rule" to the resolution of the mechanism of the l-phenylalanine dehydrogenase catalyzed reaction.

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Year:  2009        PMID: 19924903      PMCID: PMC2907749          DOI: 10.1021/bi901514h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  The location of active site opening and closing events in the prehydride transfer phase of the oxidative deamination reaction catalyzed by bovine liver glutamate dehydrogenase using a novel pH jump approach.

Authors:  S K Saha; H F Fisher
Journal:  Biochim Biophys Acta       Date:  1999-04-12

2.  The interpretation of multiple-step transient-state kinetic isotope effects.

Authors:  Steven J Maniscalco; Jon F Tally; Harvey F Fisher
Journal:  Arch Biochem Biophys       Date:  2004-05-15       Impact factor: 4.013

3.  Transient-state kinetic approach to mechanisms of enzymatic catalysis.

Authors:  Harvey F Fisher
Journal:  Acc Chem Res       Date:  2005-03       Impact factor: 22.384

4.  Relationship between the time-dependence of a transient-state kinetic isotope effect and the location of complexes in a reaction sequence.

Authors:  Harvey F Fisher; Bruce A Palfey; Steven J Maniscalco; Lawrence Indyk
Journal:  J Phys Chem A       Date:  2006-04-06       Impact factor: 2.781

5.  Rhodococcus L-phenylalanine dehydrogenase: kinetics, mechanism, and structural basis for catalytic specificity.

Authors:  N M Brunhuber; J B Thoden; J S Blanchard; J L Vanhooke
Journal:  Biochemistry       Date:  2000-08-08       Impact factor: 3.162

6.  Detection of multiple active site domain motions in transient-state component time courses of the Clostridium symbiosum L-glutamate dehydrogenase-catalyzed oxidative deamination reaction.

Authors:  Jon F Tally; Steven J Maniscalco; Swapan K Saha; Harvey F Fisher
Journal:  Biochemistry       Date:  2002-09-17       Impact factor: 3.162

7.  Kinetic mechanism of glutamate dehydrogenase.

Authors:  J E Rife; W W Cleland
Journal:  Biochemistry       Date:  1980-05-27       Impact factor: 3.162

8.  Conformational flexibility in glutamate dehydrogenase. Role of water in substrate recognition and catalysis.

Authors:  T J Stillman; P J Baker; K L Britton; D W Rice
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

9.  Identification and characterization of kinetically competent carbinolamine and alpha-iminoglutarate complexes in the glutamate dehydrogenase-catalyzed oxidation of L-glutamate using a multiwavelength transient state approach.

Authors:  S J Maniscalco; S K Saha; H F Fisher
Journal:  Biochemistry       Date:  1998-10-13       Impact factor: 3.162

  9 in total

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