Literature DB >> 19910237

Fluorescent protein-based biosensors: resolving spatiotemporal dynamics of signaling.

Lisa M DiPilato1, Jin Zhang.   

Abstract

Cellular processes are orchestrated by the precise coordination and regulation of molecular events in the cell. Fluorescent protein-based biosensors coupled with live-cell imaging have enabled the visualization of these events in real time and helped shape some of the current concepts of signal transduction, such as spatial compartmentation. The quantitative information produced by these tools has been incorporated into mathematical models that are capable of predicting highly complex and dynamic behaviors of cellular signaling networks, thus providing a systems level understanding of how pathways interact to produce a functional response. Finally, with technological advances in high-throughput and in vivo imaging, these molecular tools promise to continually engender significant contributions to our understanding of cellular processes under normal and diseased conditions. 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 19910237      PMCID: PMC2819568          DOI: 10.1016/j.cbpa.2009.10.012

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  36 in total

1.  Live-cell imaging of enzyme-substrate interaction reveals spatial regulation of PTP1B.

Authors:  Ivan A Yudushkin; Andreas Schleifenbaum; Ali Kinkhabwala; Benjamin G Neel; Carsten Schultz; Philippe I H Bastiaens
Journal:  Science       Date:  2007-01-05       Impact factor: 47.728

Review 2.  FRET-based biosensors for protein kinases: illuminating the kinome.

Authors:  Jin Zhang; Michael D Allen
Journal:  Mol Biosyst       Date:  2007-08-21

Review 3.  Beta-arrestin-biased ligands at seven-transmembrane receptors.

Authors:  Jonathan D Violin; Robert J Lefkowitz
Journal:  Trends Pharmacol Sci       Date:  2007-07-20       Impact factor: 14.819

Review 4.  Live-cell imaging of cAMP dynamics.

Authors:  Debbie Willoughby; Dermot M F Cooper
Journal:  Nat Methods       Date:  2007-12-28       Impact factor: 28.547

5.  Cell shape and negative links in regulatory motifs together control spatial information flow in signaling networks.

Authors:  Susana R Neves; Panayiotis Tsokas; Anamika Sarkar; Elizabeth A Grace; Padmini Rangamani; Stephen M Taubenfeld; Cristina M Alberini; James C Schaff; Robert D Blitzer; Ion I Moraru; Ravi Iyengar
Journal:  Cell       Date:  2008-05-16       Impact factor: 41.582

Review 6.  Imaging in systems biology.

Authors:  Sean G Megason; Scott E Fraser
Journal:  Cell       Date:  2007-09-07       Impact factor: 41.582

Review 7.  Lipid rafts and membrane traffic.

Authors:  Michael F Hanzal-Bayer; John F Hancock
Journal:  FEBS Lett       Date:  2007-03-15       Impact factor: 4.124

8.  Reading dynamic kinase activity in living cells for high-throughput screening.

Authors:  Michael D Allen; Lisa M DiPilato; Meghdad Rahdar; Yunzhao R Ren; Curtis Chong; Jun O Liu; Jin Zhang
Journal:  ACS Chem Biol       Date:  2006-07-21       Impact factor: 5.100

9.  beta2-adrenergic receptor signaling and desensitization elucidated by quantitative modeling of real time cAMP dynamics.

Authors:  Jonathan D Violin; Lisa M DiPilato; Necmettin Yildirim; Timothy C Elston; Jin Zhang; Robert J Lefkowitz
Journal:  J Biol Chem       Date:  2007-11-28       Impact factor: 5.157

10.  beta-arrestin-biased agonism at the beta2-adrenergic receptor.

Authors:  Matthew T Drake; Jonathan D Violin; Erin J Whalen; James W Wisler; Sudha K Shenoy; Robert J Lefkowitz
Journal:  J Biol Chem       Date:  2007-12-17       Impact factor: 5.157

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  15 in total

1.  Targeting therapeutic effects: subcellular location matters. Focus on "Pharmacological AMP-kinase activators have compartment-specific effects on cell physiology".

Authors:  Judy Creighton
Journal:  Am J Physiol Cell Physiol       Date:  2011-09-28       Impact factor: 4.249

Review 2.  A practical method for monitoring FRET-based biosensors in living animals using two-photon microscopy.

Authors:  Wen Tao; Michael Rubart; Jennifer Ryan; Xiao Xiao; Chunping Qiao; Takashi Hato; Michael W Davidson; Kenneth W Dunn; Richard N Day
Journal:  Am J Physiol Cell Physiol       Date:  2015-09-02       Impact factor: 4.249

3.  A simple approach for measuring FRET in fluorescent biosensors using two-photon microscopy.

Authors:  Richard N Day; Wen Tao; Kenneth W Dunn
Journal:  Nat Protoc       Date:  2016-09-29       Impact factor: 13.491

4.  PIE-FLIM Measurements of Two Different FRET-Based Biosensor Activities in the Same Living Cells.

Authors:  Christopher A Reissaus; Kathleen H Day; Raghavendra G Mirmira; Kenneth W Dunn; Fredrick M Pavalko; Richard N Day
Journal:  Biophys J       Date:  2020-03-10       Impact factor: 4.033

Review 5.  Fluorescent proteins for FRET microscopy: monitoring protein interactions in living cells.

Authors:  Richard N Day; Michael W Davidson
Journal:  Bioessays       Date:  2012-03-07       Impact factor: 4.345

6.  Biosensor Förster resonance energy transfer detection by the phasor approach to fluorescence lifetime imaging microscopy.

Authors:  Elizabeth Hinde; Michelle A Digman; Christopher Welch; Klaus M Hahn; Enrico Gratton
Journal:  Microsc Res Tech       Date:  2011-08-19       Impact factor: 2.769

7.  New perspectives in cAMP-signaling modulation.

Authors:  Magali Berthouze; Anne-Coline Laurent; Magali Breckler; Frank Lezoualc'h
Journal:  Curr Heart Fail Rep       Date:  2011-09

8.  Intravital microscopy of biosensor activities and intrinsic metabolic states.

Authors:  Seth Winfree; Takashi Hato; Richard N Day
Journal:  Methods       Date:  2017-04-21       Impact factor: 3.608

Review 9.  Optical sensors to gain mechanistic insights into signaling assemblies.

Authors:  Brian Tenner; Sohum Mehta; Jin Zhang
Journal:  Curr Opin Struct Biol       Date:  2016-09-06       Impact factor: 6.809

Review 10.  Imaging beyond the proteome.

Authors:  Pamela V Chang; Carolyn R Bertozzi
Journal:  Chem Commun (Camb)       Date:  2012-07-17       Impact factor: 6.222

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