Literature DB >> 17803903

Imaging in systems biology.

Sean G Megason1, Scott E Fraser.   

Abstract

Most systems biology approaches involve determining the structure of biological circuits using genomewide "-omic" analyses. Yet imaging offers the unique advantage of watching biological circuits function over time at single-cell resolution in the intact animal. Here, we discuss the power of integrating imaging tools with more conventional -omic approaches to analyze the biological circuits of microorganisms, plants, and animals.

Mesh:

Year:  2007        PMID: 17803903     DOI: 10.1016/j.cell.2007.08.031

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  102 in total

1.  Microfluidics-integrated time-lapse imaging for analysis of cellular dynamics.

Authors:  Dirk R Albrecht; Gregory H Underhill; Joshua Resnikoff; Avital Mendelson; Sangeeta N Bhatia; Jagesh V Shah
Journal:  Integr Biol (Camb)       Date:  2010-03-19       Impact factor: 2.192

2.  Coding design of positional information for robust morphogenesis.

Authors:  Yoshihiro Morishita; Yoh Iwasa
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

3.  Measurement of the copy number of the master quorum-sensing regulator of a bacterial cell.

Authors:  Shu-Wen Teng; Yufang Wang; Kimberly C Tu; Tao Long; Pankaj Mehta; Ned S Wingreen; Bonnie L Bassler; N P Ong
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

4.  Photomodulatable fluorescent proteins for imaging cell dynamics and cell fate.

Authors:  Sonja Nowotschin; Anna-Katerina Hadjantonakis
Journal:  Organogenesis       Date:  2009-10       Impact factor: 2.500

5.  Efficient processing and analysis of large-scale light-sheet microscopy data.

Authors:  Fernando Amat; Burkhard Höckendorf; Yinan Wan; William C Lemon; Katie McDole; Philipp J Keller
Journal:  Nat Protoc       Date:  2015-10-01       Impact factor: 13.491

6.  The smart and gentle microscope.

Authors:  Nico Scherf; Jan Huisken
Journal:  Nat Biotechnol       Date:  2015-08       Impact factor: 54.908

Review 7.  Bioelectric mechanisms in regeneration: Unique aspects and future perspectives.

Authors:  Michael Levin
Journal:  Semin Cell Dev Biol       Date:  2009-05-03       Impact factor: 7.727

8.  Fast fluorescence microscopy for imaging the dynamics of embryonic development.

Authors:  Julien Vermot; Scott E Fraser; Michael Liebling
Journal:  HFSP J       Date:  2008-05-13

9.  Using noise to probe and characterize gene circuits.

Authors:  Chris D Cox; James M McCollum; Michael S Allen; Roy D Dar; Michael L Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-31       Impact factor: 11.205

10.  De novo inference of systems-level mechanistic models of development from live-imaging-based phenotype analysis.

Authors:  Zhuo Du; Anthony Santella; Fei He; Michael Tiongson; Zhirong Bao
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

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