Literature DB >> 19909267

Splicing, cis genetic variation and disease.

Cathy J Jensen1, Brian J Oldfield, Justin P Rubio.   

Abstract

Splicing is a post-transcriptional modification of RNA during which introns are removed and exons are joined. Most of the mammalian genes undergo constitutive and alternative splicing events. In addition to the strong signals of the splice sites, splicing is influenced at a distance by a range of trans factors that interact with cis regulatory elements and influence the spliceosome. The intention of the present mini-review is to give some insights into the complexity of this interaction and to introduce the consequences of some kinds of detrimental genetic variation on alternative splicing and disease.

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Year:  2009        PMID: 19909267     DOI: 10.1042/BST0371311

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  14 in total

1.  Association between single-nucleotide polymorphisms in DNA double-strand break repair genes and prostate cancer aggressiveness in the Spanish population.

Authors:  L A Henríquez-Hernández; A Valenciano; P Foro-Arnalot; M J Álvarez-Cubero; J M Cozar; J F Suárez-Novo; M Castells-Esteve; P Fernández-Gonzalo; B De-Paula-Carranza; M Ferrer; F Guedea; G Sancho-Pardo; J Craven-Bartle; M J Ortiz-Gordillo; P Cabrera-Roldán; J I Rodríguez-Melcón; E Herrera-Ramos; C Rodríguez-Gallego; P C Lara
Journal:  Prostate Cancer Prostatic Dis       Date:  2016-01-12       Impact factor: 5.554

Review 2.  Alterations in the expression and activity of pre-mRNA splicing factors in hepatocarcinogenesis.

Authors:  Carmen Berasain; María Elizalde; Raquel Urtasun; Josefa Castillo; Oihane García-Irigoyen; Iker Uriarte; Maria U Latasa; Jesús Prieto; Matías A Avila
Journal:  Hepat Oncol       Date:  2014-03-20

Review 3.  Impairment of pre-mRNA splicing in liver disease: mechanisms and consequences.

Authors:  Carmen Berasain; Saioa Goñi; Josefa Castillo; María Ujue Latasa; Jesús Prieto; Matías A Avila
Journal:  World J Gastroenterol       Date:  2010-07-07       Impact factor: 5.742

4.  Pre-B cell leukemia homeobox 1 is associated with lupus susceptibility in mice and humans.

Authors:  Carla M Cuda; Shiwu Li; Shujuan Liang; Yiming Yin; Hari Hara S K Potula; Zhiwei Xu; Mayami Sengupta; Yifang Chen; Edward Butfiloski; Henry Baker; Lung-Ji Chang; Igor Dozmorov; Eric S Sobel; Laurence Morel
Journal:  J Immunol       Date:  2011-12-16       Impact factor: 5.422

5.  A novel point mutation within the EDA gene causes an exon dropping in mature RNA in Holstein Friesian cattle breed affected by X-linked anhidrotic ectodermal dysplasia.

Authors:  Maria Gargani; Alessio Valentini; Lorraine Pariset
Journal:  BMC Vet Res       Date:  2011-07-08       Impact factor: 2.741

6.  An apparently silent nucleotide substitution (c.7056C>T) in the von Willebrand factor gene is responsible for type 1 von Willebrand disease.

Authors:  Viviana Daidone; Lisa Gallinaro; Maria Grazia Cattini; Elena Pontara; Antonella Bertomoro; Antonio Pagnan; Alessandra Casonato
Journal:  Haematologica       Date:  2011-03-10       Impact factor: 9.941

7.  A synonymous germline variant PALB2 c.18G>T (p.Gly6=) disrupts normal splicing in a family with pancreatic and breast cancers.

Authors:  Ciyu Yang; Ozge Ceyhan-Birsoy; Diana Mandelker; Sowmya Jairam; Amanda Catchings; Eileen M O'Reilly; Michael F Walsh; Liying Zhang
Journal:  Breast Cancer Res Treat       Date:  2018-09-25       Impact factor: 4.872

8.  Role of cholesterol 24S-hydroxylase gene polymorphism (rs754203) in primary open angle glaucoma.

Authors:  Georg Mossböck; Martin Weger; Christoph Faschinger; Otto Schmut; Wilfried Renner; Andreas Wedrich; Christina Zimmermann; Yosuf El-Shabrawi
Journal:  Mol Vis       Date:  2011-02-26       Impact factor: 2.367

9.  Genome-wide approaches to dissect the roles of RNA binding proteins in translational control: implications for neurological diseases.

Authors:  Katannya Kapeli; Gene W Yeo
Journal:  Front Neurosci       Date:  2012-10-02       Impact factor: 4.677

10.  Dual role of G-runs and hnRNP F in the regulation of a mutation-activated pseudoexon in the fibrinogen gamma-chain transcript.

Authors:  Valeria Rimoldi; Giulia Soldà; Rosanna Asselta; Silvia Spena; Cristiana Stuani; Emanuele Buratti; Stefano Duga
Journal:  PLoS One       Date:  2013-03-22       Impact factor: 3.240

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