Literature DB >> 30190958

Alterations in the expression and activity of pre-mRNA splicing factors in hepatocarcinogenesis.

Carmen Berasain1,2,1,2, María Elizalde1,2,1,2, Raquel Urtasun1,2,1,2, Josefa Castillo1,1, Oihane García-Irigoyen1,2,1,2, Iker Uriarte1,2,1,2, Maria U Latasa1,2,1,2, Jesús Prieto1,2,1,2, Matías A Avila1,2,1,2.   

Abstract

Hepatocellular carcinoma (HCC) is a molecularly complex tumor that is resistant to standard and targeted therapies, and thus a deadly disease. In this context, the identification of key alterations driving HCC development is therefore essential. The implementation of next-generation sequencing techniques has underscored earlier realizations of the marked dysregulation of pre-mRNA splicing in HCC. Impairments in alternative splicing may lead to the expression of protumorigenic protein isoforms and to the generation of unstable mRNA species. Mechanistically, mutations in key nucleotides are responsible for many of these alterations in different types of tumors. However, changes in the expression of factors involved in the regulation of the splicing machinery are also important determinants in the derangement of pre-mRNA splicing. Here we discuss recent reports on the alteration of splicing factors in HCC, the pathological significance of these changes, and the identification of cell signaling pathways leading to the missplicing of genes in hepatocarcinogenesis.

Entities:  

Year:  2014        PMID: 30190958      PMCID: PMC6095334          DOI: 10.2217/hep.13.17

Source DB:  PubMed          Journal:  Hepat Oncol        ISSN: 2045-0923


  79 in total

1.  Expression of the splicing factor gene SFRS10 is reduced in human obesity and contributes to enhanced lipogenesis.

Authors:  Jussi Pihlajamäki; Carles Lerin; Paula Itkonen; Tanner Boes; Thomas Floss; Joshua Schroeder; Farrell Dearie; Sarah Crunkhorn; Furkan Burak; Josep C Jimenez-Chillaron; Tiina Kuulasmaa; Pekka Miettinen; Peter J Park; Imad Nasser; Zhenwen Zhao; Zhaiyi Zhang; Yan Xu; Wolfgang Wurst; Hongmei Ren; Andrew J Morris; Stefan Stamm; Allison B Goldfine; Markku Laakso; Mary Elizabeth Patti
Journal:  Cell Metab       Date:  2011-08-03       Impact factor: 27.287

Review 2.  Spliceosome structure and function.

Authors:  Cindy L Will; Reinhard Lührmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-07-01       Impact factor: 10.005

Review 3.  Impairment of pre-mRNA splicing in liver disease: mechanisms and consequences.

Authors:  Carmen Berasain; Saioa Goñi; Josefa Castillo; María Ujue Latasa; Jesús Prieto; Matías A Avila
Journal:  World J Gastroenterol       Date:  2010-07-07       Impact factor: 5.742

Review 4.  Shuttling SR proteins: more than splicing factors.

Authors:  Laure Twyffels; Cyril Gueydan; Véronique Kruys
Journal:  FEBS J       Date:  2011-08-24       Impact factor: 5.542

Review 5.  Evolution of SR protein and hnRNP splicing regulatory factors.

Authors:  Anke Busch; Klemens J Hertel
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-09-02       Impact factor: 9.957

Review 6.  Targeting the HGF/c-MET pathway in hepatocellular carcinoma.

Authors:  Lipika Goyal; Mandar D Muzumdar; Andrew X Zhu
Journal:  Clin Cancer Res       Date:  2013-02-06       Impact factor: 12.531

Review 7.  Opportunities and methods for studying alternative splicing in cancer with RNA-Seq.

Authors:  Huijuan Feng; Zhiyi Qin; Xuegong Zhang
Journal:  Cancer Lett       Date:  2012-11-27       Impact factor: 8.679

8.  hnRNP A1 and hnRNP F modulate the alternative splicing of exon 11 of the insulin receptor gene.

Authors:  Indrani Talukdar; Supriya Sen; Rodolfo Urbano; James Thompson; John R Yates; Nicholas J G Webster
Journal:  PLoS One       Date:  2011-11-23       Impact factor: 3.240

9.  High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity.

Authors:  Weiyin Zhou; Margaret A Calciano; Heather Jordan; Michael Brenner; Seth Johnson; Darong Wu; Lin Lei; Diego Pallares; Pascale Beurdeley; Fabien Rouet; Pritmohinder S Gill; Laurent Bracco; Cyril Soucaille; Richard Einstein
Journal:  BMC Genet       Date:  2009-10-05       Impact factor: 2.797

10.  De-regulation of common housekeeping genes in hepatocellular carcinoma.

Authors:  Samuel Waxman; Elisa Wurmbach
Journal:  BMC Genomics       Date:  2007-07-18       Impact factor: 3.969

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  3 in total

Review 1.  Splicing alterations contributing to cancer hallmarks in the liver: central role of dedifferentiation and genome instability.

Authors:  Maddalen Jimenez; María Arechederra; Matías A Ávila; Carmen Berasain
Journal:  Transl Gastroenterol Hepatol       Date:  2018-10-31

2.  Hepatocyte Deletion of IGF2 Prevents DNA Damage and Tumor Formation in Hepatocellular Carcinoma.

Authors:  Deepak Kumar; Manasi Das; Alexis Oberg; Debashis Sahoo; Panyisha Wu; Consuelo Sauceda; Lily Jih; Lesley G Ellies; Magda T Langiewicz; Supriya Sen; Nicholas J G Webster
Journal:  Adv Sci (Weinh)       Date:  2022-05-26       Impact factor: 17.521

Review 3.  Aberrant expression of alternative isoforms of transcription factors in hepatocellular carcinoma.

Authors:  Olga Krivtsova; Anna Makarova; Natalia Lazarevich
Journal:  World J Hepatol       Date:  2018-10-27
  3 in total

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