Literature DB >> 33341474

Targeting of viral RNAs by Upf1-mediated RNA decay pathways.

Jared P May1, Anne E Simon2.   

Abstract

Viral RNAs are susceptible to co-translational RNA decay pathways mediated by the RNA helicase Upstream frameshift 1 (Upf1). Upf1 is a key component in nonsense-mediated decay (NMD), Staufen1-mediated mRNA decay (SMD), and structure-mediated RNA decay (SRD) pathways, among others. Diverse families of viruses have features that predispose them to Upf1 targeting, but have evolved means to escape decay through the action of cis-acting or trans-acting viral factors. Studies aimed at understanding how viruses are subjected to and circumvent NMD have increased our understanding of NMD target selection of host mRNAs. This review focuses on the knowledge gained from studying NMD in viral systems as well as related Upf1-dependent pathways and how these pathways restrict virus replication.
Copyright © 2020 Elsevier B.V. All rights reserved.

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Year:  2020        PMID: 33341474      PMCID: PMC8744489          DOI: 10.1016/j.coviro.2020.11.002

Source DB:  PubMed          Journal:  Curr Opin Virol        ISSN: 1879-6257            Impact factor:   7.090


  97 in total

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Review 3.  Gene expression networks: competing mRNA decay pathways in mammalian cells.

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4.  Non-structural protein 1 of influenza viruses inhibits rapid mRNA degradation mediated by double-stranded RNA-binding protein, staufen1.

Authors:  Hana Cho; Sang Ho Ahn; Kyoung Mi Kim; Yoon Ki Kim
Journal:  FEBS Lett       Date:  2013-05-28       Impact factor: 4.124

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Authors:  Sébastien Durand; Jens Lykke-Andersen
Journal:  Nat Struct Mol Biol       Date:  2013-05-12       Impact factor: 15.369

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Authors:  Updesh Dixit; Ashutosh K Pandey; Priya Mishra; Amitabha Sengupta; Virendra N Pandey
Journal:  Nucleic Acids Res       Date:  2016-04-22       Impact factor: 16.971

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Authors:  Stacey L Baker; J Robert Hogg
Journal:  PLoS One       Date:  2017-03-21       Impact factor: 3.240

8.  The landscape of transcription initiation across latent and lytic KSHV genomes.

Authors:  Xiang Ye; Yang Zhao; John Karijolich
Journal:  PLoS Pathog       Date:  2019-06-12       Impact factor: 6.823

9.  Separate domains of G3BP promote efficient clustering of alphavirus replication complexes and recruitment of the translation initiation machinery.

Authors:  Benjamin Götte; Marc D Panas; Kirsi Hellström; Lifeng Liu; Baila Samreen; Ola Larsson; Tero Ahola; Gerald M McInerney
Journal:  PLoS Pathog       Date:  2019-06-14       Impact factor: 6.823

Review 10.  UPF1-Mediated RNA Decay-Danse Macabre in a Cloud.

Authors:  Daria Lavysh; Gabriele Neu-Yilik
Journal:  Biomolecules       Date:  2020-07-04
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Review 2.  Minding the message: tactics controlling RNA decay, modification, and translation in virus-infected cells.

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Journal:  Genes Dev       Date:  2022-02-01       Impact factor: 12.890

3.  Unheeded SARS-CoV-2 proteins? A deep look into negative-sense RNA.

Authors:  Martin Bartas; Adriana Volná; Christopher A Beaudoin; Ebbe Toftgaard Poulsen; Jiří Červeň; Václav Brázda; Vladimír Špunda; Tom L Blundell; Petr Pečinka
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  3 in total

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