Literature DB >> 19908073

Effect of pathogenic mutations on the structure and dynamics of Alzheimer's A beta 42-amyloid oligomers.

Kristin Kassler1, Anselm H C Horn, Heinrich Sticht.   

Abstract

Converging lines of evidence suggest that soluble A beta-amyloid oligomers play a pivotal role in the pathogenesis of Alzheimer's disease, and present direct effectors of synaptic and cognitive dysfunction. Three pathological E22-A beta-amyloid point mutants (E22G, E22K, E22Q) and the deletion mutant E22 Delta exhibit an enhanced tendency to form prefibrillar aggregates. The present study assessed the effect of these four mutations using molecular dynamics simulations and subsequent structural and energetic analyses. Our data shows that E22 plays a unique role in wild type A beta, since it has a destabilising effect on the oligomer structure due to electrostatic repulsion between adjacent E22 side chains. Mutations in which E22 is replaced by an uncharged residue result in higher oligomer stability. This effect is also observed to a lesser extent for the E22K mutation and is consistent with its lower pathogenicity compared to other mutants. Interestingly, deletion of E22 does not destroy the amyloid fold but is compensated by local changes in the backbone geometry that allow the preservation of a structurally important salt bridge. The finding that all mutant oligomers investigated exhibit higher internal stability than the wild type offers an explanation for the experimentally observed enhanced oligomer formation and stability.

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Year:  2009        PMID: 19908073     DOI: 10.1007/s00894-009-0611-1

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  39 in total

1.  Soluble pool of Abeta amyloid as a determinant of severity of neurodegeneration in Alzheimer's disease.

Authors:  C A McLean; R A Cherny; F W Fraser; S J Fuller; M J Smith; K Beyreuther; A I Bush; C L Masters
Journal:  Ann Neurol       Date:  1999-12       Impact factor: 10.422

2.  Clustering Molecular Dynamics Trajectories: 1. Characterizing the Performance of Different Clustering Algorithms.

Authors:  Jianyin Shao; Stephen W Tanner; Nephi Thompson; Thomas E Cheatham
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

3.  3D structure of Alzheimer's amyloid-beta(1-42) fibrils.

Authors:  Thorsten Lührs; Christiane Ritter; Marc Adrian; Dominique Riek-Loher; Bernd Bohrmann; Heinz Döbeli; David Schubert; Roland Riek
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-17       Impact factor: 11.205

4.  Comparison of multiple Amber force fields and development of improved protein backbone parameters.

Authors:  Viktor Hornak; Robert Abel; Asim Okur; Bentley Strockbine; Adrian Roitberg; Carlos Simmerling
Journal:  Proteins       Date:  2006-11-15

5.  Protofibril assemblies of the arctic, Dutch, and Flemish mutants of the Alzheimer's Abeta1-40 peptide.

Authors:  Nicolas Lux Fawzi; Kevin L Kohlstedt; Yuka Okabe; Teresa Head-Gordon
Journal:  Biophys J       Date:  2007-11-21       Impact factor: 4.033

6.  Protein structure modeling with MODELLER.

Authors:  Narayanan Eswar; David Eramian; Ben Webb; Min-Yi Shen; Andrej Sali
Journal:  Methods Mol Biol       Date:  2008

7.  A modified version of the Cornell et al. force field with improved sugar pucker phases and helical repeat.

Authors:  T E Cheatham; P Cieplak; P A Kollman
Journal:  J Biomol Struct Dyn       Date:  1999-02

8.  The solvent protection of alzheimer amyloid-beta-(1-42) fibrils as determined by solution NMR spectroscopy.

Authors:  Anders Olofsson; A Elisabeth Sauer-Eriksson; Anders Ohman
Journal:  J Biol Chem       Date:  2005-10-07       Impact factor: 5.157

9.  Oligomerization of beta-amyloid of the Alzheimer's and the Dutch-cerebral-haemorrhage types.

Authors:  A K Sian; E R Frears; O M El-Agnaf; B P Patel; M F Manca; G Siligardi; R Hussain; B M Austen
Journal:  Biochem J       Date:  2000-07-01       Impact factor: 3.857

Review 10.  The amyloid hypothesis of Alzheimer's disease: progress and problems on the road to therapeutics.

Authors:  John Hardy; Dennis J Selkoe
Journal:  Science       Date:  2002-07-19       Impact factor: 47.728

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  11 in total

1.  Oral treatment with the d-enantiomeric peptide D3 improves the pathology and behavior of Alzheimer's Disease transgenic mice.

Authors:  Susanne Aileen Funke; Thomas van Groen; Inga Kadish; Dirk Bartnik; Luitgard Nagel-Steger; Oleksandr Brener; Torsten Sehl; Renu Batra-Safferling; Christine Moriscot; Guy Schoehn; Anselm H C Horn; Andreas Müller-Schiffmann; Carsten Korth; Heinrich Sticht; Dieter Willbold
Journal:  ACS Chem Neurosci       Date:  2010-08-02       Impact factor: 4.418

2.  Familial Alzheimer's Disease Mutations within the Amyloid Precursor Protein Alter the Aggregation and Conformation of the Amyloid-β Peptide.

Authors:  Asa Hatami; Sanaz Monjazeb; Saskia Milton; Charles G Glabe
Journal:  J Biol Chem       Date:  2017-01-03       Impact factor: 5.157

Review 3.  Insights into the Molecular Mechanisms of Alzheimer's and Parkinson's Diseases with Molecular Simulations: Understanding the Roles of Artificial and Pathological Missense Mutations in Intrinsically Disordered Proteins Related to Pathology.

Authors:  Orkid Coskuner-Weber; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2018-01-24       Impact factor: 5.923

4.  Macrocyclic Peptides Derived from Familial Alzheimer's Disease Mutants Show Charge-Dependent Oligomeric Assembly and Toxicity.

Authors:  William J Howitz; Gretchen Guaglianone; Kate J McKnelly; Katelyn Haduong; Shareen N Ashby; Mohamed Laayouni; James S Nowick
Journal:  ACS Chem Neurosci       Date:  2022-02-22       Impact factor: 5.780

5.  The conformational stability of nonfibrillar amyloid-β peptide oligomers critically depends on the C-terminal peptide length.

Authors:  Eileen Socher; Heinrich Sticht; Anselm H C Horn
Journal:  ACS Chem Neurosci       Date:  2014-02-11       Impact factor: 4.418

6.  Brazilin inhibits amyloid β-protein fibrillogenesis, remodels amyloid fibrils and reduces amyloid cytotoxicity.

Authors:  Wen-Jie Du; Jing-Jing Guo; Ming-Tao Gao; Sheng-Quan Hu; Xiao-Yan Dong; Yi-Fan Han; Fu-Feng Liu; Shaoyi Jiang; Yan Sun
Journal:  Sci Rep       Date:  2015-01-23       Impact factor: 4.379

7.  Reorientational Dynamics of Amyloid-β from NMR Spin Relaxation and Molecular Simulation.

Authors:  Nasrollah Rezaei-Ghaleh; Giacomo Parigi; Markus Zweckstetter
Journal:  J Phys Chem Lett       Date:  2019-06-06       Impact factor: 6.475

8.  Role of the N-terminus for the stability of an amyloid-β fibril with three-fold symmetry.

Authors:  Christian A Söldner; Heinrich Sticht; Anselm H C Horn
Journal:  PLoS One       Date:  2017-10-12       Impact factor: 3.240

9.  Differential effect of amyloid beta peptides on mitochondrial axonal trafficking depends on their state of aggregation and binding to the plasma membrane.

Authors:  Liang Zhang; Sergey Trushin; Trace A Christensen; Utkarsh Tripathi; Courtney Hong; Rachel E Geroux; Kyle G Howell; Joseph F Poduslo; Eugenia Trushina
Journal:  Neurobiol Dis       Date:  2018-03-02       Impact factor: 5.996

10.  Structural progression of amyloid-β Arctic mutant aggregation in cells revealed by multiparametric imaging.

Authors:  Meng Lu; Neil Williamson; Ajay Mishra; Claire H Michel; Clemens F Kaminski; Alan Tunnacliffe; Gabriele S Kaminski Schierle
Journal:  J Biol Chem       Date:  2018-11-30       Impact factor: 5.157

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