Literature DB >> 19905793

Fractional brownian motion versus the continuous-time random walk: a simple test for subdiffusive dynamics.

Marcin Magdziarz1, Aleksander Weron, Krzysztof Burnecki, Joseph Klafter.   

Abstract

Fractional Brownian motion with Hurst index less then 1/2 and continuous-time random walk with heavy tailed waiting times (and the corresponding fractional Fokker-Planck equation) are two different processes that lead to a subdiffusive behavior widespread in complex systems. We propose a simple test, based on the analysis of the so-called p variations, which allows distinguishing between the two models on the basis of one realization of the unknown process. We apply the test to the data of Golding and Cox [Phys. Rev. Lett. 96, 098102 (2006)10.1103/PhysRevLett.96.098102], describing the motion of individual fluorescently labeled mRNA molecules inside live E. coli cells. It is found that the data does not follow heavy tailed continuous-time random walk. The test shows that it is likely that fractional Brownian motion is the underlying process.

Entities:  

Year:  2009        PMID: 19905793     DOI: 10.1103/PhysRevLett.103.180602

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  34 in total

1.  Analytical tools to distinguish the effects of localization error, confinement, and medium elasticity on the velocity autocorrelation function.

Authors:  Stephanie C Weber; Michael A Thompson; W E Moerner; Andrew J Spakowitz; Julie A Theriot
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

2.  Two-dimensional continuum percolation threshold for diffusing particles of nonzero radius.

Authors:  Michael J Saxton
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

3.  When Brownian diffusion is not Gaussian.

Authors:  Bo Wang; James Kuo; Sung Chul Bae; Steve Granick
Journal:  Nat Mater       Date:  2012-05-22       Impact factor: 43.841

4.  Distribution of directional change as a signature of complex dynamics.

Authors:  Stanislav Burov; S M Ali Tabei; Toan Huynh; Michael P Murrell; Louis H Philipson; Stuart A Rice; Margaret L Gardel; Norbert F Scherer; Aaron R Dinner
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

5.  Chromosomal locus tracking with proper accounting of static and dynamic errors.

Authors:  Mikael P Backlund; Ryan Joyner; W E Moerner
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-06-29

6.  Ergodic and nonergodic processes coexist in the plasma membrane as observed by single-molecule tracking.

Authors:  Aubrey V Weigel; Blair Simon; Michael M Tamkun; Diego Krapf
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

7.  Identifying transport behavior of single-molecule trajectories.

Authors:  Benjamin M Regner; Daniel M Tartakovsky; Terrence J Sejnowski
Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

8.  Single-Particle Diffusion Characterization by Deep Learning.

Authors:  Naor Granik; Lucien E Weiss; Elias Nehme; Maayan Levin; Michael Chein; Eran Perlson; Yael Roichman; Yoav Shechtman
Journal:  Biophys J       Date:  2019-06-22       Impact factor: 4.033

9.  Subdiffusive Dynamics Lead to Depleted Particle Densities near Cellular Borders.

Authors:  William R Holmes
Journal:  Biophys J       Date:  2019-02-28       Impact factor: 4.033

10.  Is protein folding sub-diffusive?

Authors:  Sergei V Krivov
Journal:  PLoS Comput Biol       Date:  2010-09-16       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.